RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 AIPL1Q9NZN9 384 aa14.86□□□□□ -0.03
PNKP-202ENST00000593706 MFHAS1Q9Y4C4 1052 aa14.86□□□□□ -0.03
PNKP-202ENST00000593706 OR1A2Q9Y585 309 aa14.86□□□□□ -0.03
PNKP-202ENST00000593706 COL12A1Q99715 3063 aa14.86□□□□□ -0.03
PNKP-202ENST00000593706 SDK2Q58EX2 2172 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 SIGLEC16A6NMB1 481 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 B8ZZF3 427 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 TMX2-CTNND1H3BSU7 103 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 CCP110O43303 1012 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 JMJD7P0C870 316 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 DESP17661 470 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 INHBCP55103 352 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 YBEYP58557 167 aaPredicted RBP14.85□□□□□ -0.03
PNKP-202ENST00000593706 SERINC3Q13530 473 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 INPP5AQ14642 412 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 WSCD2Q2TBF2 565 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 FIGNQ5HY92 759 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 WDR59Q6PJI9 974 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 MCOLN2Q8IZK6 566 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 FBXO39Q8N4B4 442 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 PDXPQ96GD0 296 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 WDR92Q96MX6 357 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 APOOQ9BUR5 198 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 PCDH12Q9NPG4 1184 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 LHX3Q9UBR4 397 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 UBA2Q9UBT2 640 aaPredicted RBP14.85□□□□□ -0.03
PNKP-202ENST00000593706 RABGEF1Q9UJ41 708 aa14.85□□□□□ -0.03
PNKP-202ENST00000593706 ATXN7L1Q9ULK2 861 aaPredicted RBP14.85□□□□□ -0.03
PNKP-202ENST00000593706 UBR5O95071 2799 aaPredicted RBP14.85□□□□□ -0.03
PNKP-202ENST00000593706 FGF10O15520 208 aaPredicted RBP14.84□□□□□ -0.03
PNKP-202ENST00000593706 SLC28A2O43868 658 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 CCDC172P0C7W6 258 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 PTMSP20962 102 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 SLC5A2P31639 672 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 UGT1A5P35504 534 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 MMP12P39900 470 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 LIG3P49916 1009 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 SRP54P61011 504 aaKnown RBP14.84□□□□□ -0.03
PNKP-202ENST00000593706 CCL7P80098 99 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 UGP2Q16851 508 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 FILIP1LQ4L180 1135 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 ACAD10Q6JQN1 1059 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 DNAJC24Q6P3W2 148 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 PRICKLE2Q7Z3G6 844 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 ZNF571Q7Z3V5 609 aaPredicted RBP14.84□□□□□ -0.03
PNKP-202ENST00000593706 CCNJLQ8IV13 435 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 OR6C4Q8NGE1 309 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 TMEM74Q96NL1 305 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 MCEEQ96PE7 176 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 SUV39H2Q9H5I1 410 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 ATP8A1Q9Y2Q0 1164 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 PCDHGA7Q9Y5G6 932 aa14.84□□□□□ -0.03
PNKP-202ENST00000593706 TSPAN11A1L157 253 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 PYCARD-AS1I3L0S3 204 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 AGRPO00253 132 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 HGFP14210 728 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 SERPINA4P29622 427 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 ZNF143P52747 638 aaPredicted RBP14.83□□□□□ -0.04
PNKP-202ENST00000593706 AIF1P55008 147 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 TPI1P60174 286 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 RPL7AP62424 266 aaKnown RBP14.83□□□□□ -0.04
PNKP-202ENST00000593706 FANCCQ00597 558 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 OGDHQ02218 1023 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 MTM1Q13496 603 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 BRAT1Q6PJG6 821 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 UMODL1-AS1Q8N2C9 162 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 Q8N9G6 341 aaPredicted RBP14.83□□□□□ -0.04
PNKP-202ENST00000593706 HCAR2Q8TDS4 363 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 COL26A1Q96A83 441 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 LRRN3Q9H3W5 708 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 HAUS4Q9H6D7 363 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 PISDQ9UG56 409 aa14.83□□□□□ -0.04
PNKP-202ENST00000593706 A0A1W2PQJ5 194 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 A0A1W2PQM1 296 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 B4DGG1 531 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 CACNB4O00305 520 aaPredicted RBP14.82□□□□□ -0.04
PNKP-202ENST00000593706 DDX3XO00571 662 aaKnown RBP eCLIP14.82□□□□□ -0.04
PNKP-202ENST00000593706 SERPINC1P01008 464 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 TNFP01375 233 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 PRKCGP05129 697 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 ELFN1P0C7U0 828 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 KRT10P13645 584 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 CCKBRP32239 447 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 MAMLD1Q13495 774 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 CYTH1Q15438 398 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 ASIC2Q16515 512 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 HGSNATQ68CP4 663 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 PLEKHA7Q6IQ23 1121 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 NYAP1Q6ZVC0 841 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 USP53Q70EK8 1073 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 TAF8Q7Z7C8 310 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 CAMK1DQ8IU85 385 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 ZNF641Q96N77 438 aaPredicted RBP14.82□□□□□ -0.04
PNKP-202ENST00000593706 TUBGCP5Q96RT8 1024 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 RBM15Q96T37 977 aaKnown RBP eCLIP14.82□□□□□ -0.04
PNKP-202ENST00000593706 ARHGAP9Q9BRR9 750 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 CLMPQ9H6B4 373 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 ATP13A3Q9H7F0 1226 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 DONSONQ9NYP3 566 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 FZD10Q9ULW2 581 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms