RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 ARHGAP25P42331 645 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 PEX5P50542 639 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 PTK2BQ14289 1009 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 RALGPS1Q5JS13 557 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 RHOT2Q8IXI1 618 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 PELI3Q8N2H9 469 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 LRRN4Q8WUT4 740 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 RFFLQ8WZ73 363 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 TBATAQ96M53 351 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 RNF157Q96PX1 679 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 RBSNQ9H1K0 784 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 SCUBE2Q9NQ36 999 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 B4GALT6Q9UBX8 382 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 INTUQ9ULD6 942 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 ZNF487B1APH4 448 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 MATN3O15232 486 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 AQP9O43315 295 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 GCATO75600 419 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 RECQL5O94762 991 aaPredicted RBP20.26■□□□□ 0.83
CIRBP-239ENST00000592467 LCA5LO95447 670 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 CDK4P11802 303 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 CCNCP24863 283 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 POLR2LP62875 67 aaKnown RBP20.26■□□□□ 0.83
CIRBP-239ENST00000592467 INPP5AQ14642 412 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 PTPRRQ15256 657 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 KCTD16Q68DU8 428 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 MAP7D3Q8IWC1 876 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 PHACTR4Q8IZ21 702 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 PLD5Q8N7P1 536 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 FUBP1Q96AE4 644 aaKnown RBP20.26■□□□□ 0.83
CIRBP-239ENST00000592467 APOLD1Q96LR9 279 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 COQ10AQ96MF6 247 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 APOOQ9BUR5 198 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 LRRC61Q9BV99 259 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 TRIM5Q9C035 493 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 CLPBQ9H078 707 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 NT5MQ9NPB1 228 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 DTLQ9NZJ0 730 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 PPIL1Q9Y3C6 166 aa20.26■□□□□ 0.83
CIRBP-239ENST00000592467 KNTC1P50748 2209 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 LAMA5O15230 3695 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 A0A1W2PQ67 120 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 NEMP2A6NFY4 417 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 SRRM3A6NNA2 597 aaPredicted RBP20.25■□□□□ 0.83
CIRBP-239ENST00000592467 A8MX80 341 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 H3BM21 787 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 LZTS3O60299 673 aaPredicted RBP20.25■□□□□ 0.83
CIRBP-239ENST00000592467 PGLSO95336 258 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 LHCGRP22888 699 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 THOP1P52888 689 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 INSM1Q01101 510 aaPredicted RBP20.25■□□□□ 0.83
CIRBP-239ENST00000592467 MTM1Q13496 603 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 NFATC4Q14934 902 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 IFI16Q16666 785 aaKnown RBP20.25■□□□□ 0.83
CIRBP-239ENST00000592467 VSIG1Q86XK7 387 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 BBS5Q8N3I7 341 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 PIH1D2Q8WWB5 315 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 HDAC11Q96DB2 347 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 MCCC1Q96RQ3 725 aaPredicted RBP20.25■□□□□ 0.83
CIRBP-239ENST00000592467 APOBEC3BQ9UH17 382 aaKnown RBP20.25■□□□□ 0.83
CIRBP-239ENST00000592467 OR1A2Q9Y585 309 aa20.25■□□□□ 0.83
CIRBP-239ENST00000592467 CELSR3Q9NYQ7 3312 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 TPP1O14773 563 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 CPP00450 1065 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 PCCBP05166 539 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 PDHA1P08559 390 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 ELFN1P0C7U0 828 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 TRIM23P36406 574 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 HADHBP55084 474 aaKnown RBP20.24■□□□□ 0.83
CIRBP-239ENST00000592467 CNGA3Q16281 694 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 ALG11Q2TAA5 492 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 HES3Q5TGS1 186 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 LRRC38Q5VT99 294 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 SLC9A4Q6AI14 798 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 PROSER1Q86XN7 944 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 ARRDC2Q8TBH0 407 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 LMX1AQ8TE12 382 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 NSMCE1Q8WV22 266 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 BTN2A2Q8WVV5 523 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 SEMA3CQ99985 751 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 DUSP23Q9BVJ7 150 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 PHTF1Q9UMS5 762 aa20.24■□□□□ 0.83
CIRBP-239ENST00000592467 ASXL3Q9C0F0 2248 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 TRABD2BA6NFA1 517 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 NPIPB15A6NHN6 443 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-239ENST00000592467 HEXIM1O94992 359 aaKnown RBP20.23■□□□□ 0.83
CIRBP-239ENST00000592467 CELA2BP08218 269 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-239ENST00000592467 ALPPL2P10696 532 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 VIPR1P32241 457 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 DSC2Q02487 901 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 NIPAL4Q0D2K0 466 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 C1orf61Q13536 156 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 DEFB133Q30KQ1 61 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 TIGD7Q6NT04 549 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-239ENST00000592467 GAS2L3Q86XJ1 694 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 CACTIN-AS1Q8N1I8 211 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 MDM1Q8TC05 714 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 PDCD6IPQ8WUM4 868 aaKnown RBP20.23■□□□□ 0.83
CIRBP-239ENST00000592467 SCRN2Q96FV2 425 aa20.23■□□□□ 0.83
CIRBP-239ENST00000592467 SMIM14Q96QK8 99 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms