RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 PIWIL4Q7Z3Z4 852 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 AMER2Q8N7J2 671 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 CCDC28BQ9BUN5 200 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 PIF1Q9H611 641 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ZNF112Q9UJU3 913 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 IGKV6D-41A0A0C4DH26 115 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 KLRC4O43908 158 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 IL6P05231 212 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 SYN1P17600 705 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 PAX7P23759 505 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 HSPA14Q0VDF9 509 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ALFQ53S48 1182 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ZNF618Q5T7W0 954 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 AFTPHQ6ULP2 937 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ABRAXAS1Q6UWZ7 409 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ZCCHC23Q6ZST2 131 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 TBC1D10AQ9BXI6 508 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 DUS2Q9NX74 493 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 GMIPQ9P107 970 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 SPATA2Q9UM82 520 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 GTF2A1LQ9UNN4 478 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 RGSL1A5PLK6 1076 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 LIN7AO14910 233 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 MLYCDO95822 493 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 SERPINA6P08185 405 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ANXA5P08758 320 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 TLX1P31314 330 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ABL2P42684 1182 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 TTPAP49638 278 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 CLCNKBP51801 687 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 FUT2Q10981 343 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 RGS21Q2M5E4 152 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ZSWIM2Q8NEG5 633 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 TSPAN14Q8NG11 270 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 VMP1Q96GC9 406 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 FAM124BQ9H5Z6 455 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 SPAG4Q9NPE6 437 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 PHPT1Q9NRX4 125 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 UBAP1Q9NZ09 502 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 MORF4L1Q9UBU8 362 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 GTF2IRD1Q9UHL9 959 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 C3orf18Q9UK00 162 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 PSME2Q9UL46 239 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 CORO2BQ9UQ03 480 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 A0A1W2PQ67 120 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 TSC22D2O75157 780 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 PFKMP08237 780 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ERCC2P18074 760 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 CORO1AP31146 461 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 CDC42P60953 191 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ACSM2AQ08AH3 577 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ACSM2BQ68CK6 577 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 SFRP1Q8N474 314 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 RTL3Q8N8U3 475 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 KBTBD8Q8NFY9 601 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ANKRD49Q8WVL7 239 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 RNF157Q96PX1 679 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 GRIP2Q9C0E4 1043 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 PLGRKTQ9HBL7 147 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 C8orf4Q9NR00 106 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ARHGEF3Q9NR81 526 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 H3BN98 237 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 CYP7B1O75881 506 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 SLC35G4P0C7Q5 338 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ATP6V1C1P21283 382 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 WARSP23381 471 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 RFC2P35250 354 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 VARS2Q5ST30 1063 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 TNS4Q8IZW8 715 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 BEND7Q8N7W2 519 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 PYDC1Q8WXC3 89 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 IRGQQ8WZA9 623 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 OMA1Q96E52 524 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 NUAK2Q9H093 628 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 ACSS3Q9H6R3 686 aa13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 NDRG2Q9UN36 371 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-216ENST00000591545 KLRG2A4D1S0 409 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 USP12O75317 370 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 PTDSS1P48651 473 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 NOMO3P69849 1222 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 MBTD1Q05BQ5 628 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 PDK3Q15120 406 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 RFX4Q33E94 735 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 FOXR1Q6PIV2 292 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 SYT12Q8IV01 421 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 HEXDCQ8WVB3 486 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 S100ZQ8WXG8 99 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 CERS2Q96G23 380 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 MYOCQ99972 504 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 OSBPL6Q9BZF3 934 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 NOL6Q9H6R4 1146 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 ZNF446Q9NWS9 450 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 ENTPD4Q9Y227 616 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 BTBD3Q9Y2F9 522 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 RAP2CQ9Y3L5 183 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 SNX8Q9Y5X2 465 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 MAGEC1O60732 1142 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 GCATO75600 419 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 RPL3P39023 403 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 ELP6Q0PNE2 266 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms