RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 RALGDSQ12967 914 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 BNIP3Q12983 259 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 LRRC14Q15048 493 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 AGERQ15109 404 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 INAVAQ3KP66 663 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 ARMC12Q5T9G4 340 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 LIPIQ6XZB0 460 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 KDM7AQ6ZMT4 941 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 BZW1Q7L1Q6 419 aaKnown RBP9.24□□□□□ -0.93
DNMT1-223ENST00000591239 CCDC50Q8IVM0 306 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 TXLNBQ8N3L3 684 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 LRRC57Q8N9N7 239 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 TP53I13Q8NBR0 393 aaPredicted RBP9.24□□□□□ -0.93
DNMT1-223ENST00000591239 EXD1Q8NHP7 514 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 BAHD1Q8TBE0 780 aaPredicted RBP9.24□□□□□ -0.93
DNMT1-223ENST00000591239 SAP25Q8TEE9 199 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 IFT43Q96FT9 208 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 RBM41Q96IZ5 413 aaKnown RBP9.24□□□□□ -0.93
DNMT1-223ENST00000591239 OLFM3Q96PB7 478 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 CDC6Q99741 560 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 DESI2Q9BSY9 194 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 BRD8Q9H0E9 1235 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 MBNL1Q9NR56 388 aaKnown RBP9.24□□□□□ -0.93
DNMT1-223ENST00000591239 GPR27Q9NS67 375 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 SAE1Q9UBE0 346 aaPredicted RBP9.24□□□□□ -0.93
DNMT1-223ENST00000591239 PHTF1Q9UMS5 762 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 PCDHA3Q9Y5H8 950 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 RAI2Q9Y5P3 530 aa9.24□□□□□ -0.93
DNMT1-223ENST00000591239 FREM2Q5SZK8 3169 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 hCG_1818297A0A087WSY0 165 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 A0A0U1RQJ8 604 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 SPTY2D1-AS1A0A0U1RR47 76 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 MACROD2A1Z1Q3 448 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 GRID2IPA4D2P6 1211 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 SDC3O75056 442 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 RECQL5O94762 991 aaPredicted RBP9.23□□□□□ -0.93
DNMT1-223ENST00000591239 PDHA1P08559 390 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 TGM2P21980 687 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 NFKBIAP25963 317 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 PMLP29590 882 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 COPS2P61201 443 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 YPEL5P62699 121 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 IFI35P80217 286 aaPredicted RBP9.23□□□□□ -0.93
DNMT1-223ENST00000591239 NIPAL4Q0D2K0 466 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 ZBTB17Q13105 803 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 PDE1CQ14123 709 aaPredicted RBP9.23□□□□□ -0.93
DNMT1-223ENST00000591239 FZD2Q14332 565 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 IHHQ14623 411 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 INPP5AQ14642 412 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 IRF4Q15306 451 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 WSCD2Q2TBF2 565 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 B4GALNT4Q76KP1 1039 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 DPPA4Q7L190 304 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 KANSL1Q7Z3B3 1105 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 GLRX5Q86SX6 157 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 CNTD1Q8N815 330 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 ARRDC2Q8TBH0 407 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 PIH1D2Q8WWB5 315 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 P3H4Q92791 437 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 SCRN2Q96FV2 425 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 IL12RB2Q99665 862 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 DNAJC28Q9NX36 388 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 SEPT10Q9P0V9 454 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 B4GALT6Q9UBX8 382 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 TRIM10Q9UDY6 481 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 PPIL1Q9Y3C6 166 aa9.23□□□□□ -0.93
DNMT1-223ENST00000591239 CEP295Q9C0D2 2601 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 AKAP13Q12802 2813 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 CCDC66A2RUB6 948 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 GOLGA8CPA6NN73 597 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 TOR1BO14657 336 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 TNFSF14O43557 240 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 FZD6O60353 706 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 CSF2P04141 144 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 MMP2P08253 660 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 PECAM1P16284 738 aaPredicted RBP9.22□□□□□ -0.93
DNMT1-223ENST00000591239 CTPS1P17812 591 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 CA4P22748 312 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 DGKAP23743 735 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 CTNNA2P26232 953 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 VIPR1P32241 457 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 CD86P42081 329 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 PEX5P50542 639 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 THOP1P52888 689 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 RWDD2BP57060 319 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 HNRNPKP61978 463 aaKnown RBP eCLIP9.22□□□□□ -0.93
DNMT1-223ENST00000591239 PTK2BQ14289 1009 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 ACOX1Q15067 660 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 PRKD1Q15139 912 aaPredicted RBP9.22□□□□□ -0.93
DNMT1-223ENST00000591239 PTPRRQ15256 657 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 CNGA3Q16281 694 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 PPP2R5EQ16537 467 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 ZNF542PQ5EBM4 170 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 TPRG1LQ5T0D9 272 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 FAM182AQ5T1J6 154 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 USP45Q70EL2 814 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 PEX26Q7Z412 305 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 NT5DC3Q86UY8 548 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 PARGQ86W56 976 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 SYCE1Q8N0S2 351 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms