RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 DPPA4Q7L190 304 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 PARGQ86W56 976 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 NDUFAF2Q8N183 169 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 MAML1Q92585 1016 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 LGMNQ99538 433 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 POLR1EQ9GZS1 481 aaKnown RBP12.14□□□□□ -0.47
TPM4-212ENST00000590180 TOR4AQ9NXH8 423 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 DTLQ9NZJ0 730 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 B4GALT6Q9UBX8 382 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 MSRB2Q9Y3D2 182 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 SHROOM3Q8TF72 1996 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 C3orf70A6NLC5 250 aaPredicted RBP12.13□□□□□ -0.47
TPM4-212ENST00000590180 C1QTNF9BB2RNN3 333 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 TOR1BO14657 336 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 NDUFA10O95299 355 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 PGLSO95336 258 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 C1QTNF9P0C862 333 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 ALPPL2P10696 532 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 KRT10P13645 584 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 NME1P15531 152 aaKnown RBP12.13□□□□□ -0.47
TPM4-212ENST00000590180 CKMT2P17540 419 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 CTPS1P17812 591 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 HTR1BP28222 390 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 VIPR1P32241 457 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 EPHB1P54762 984 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 DSC2Q02487 901 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 PPARDQ03181 441 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 RALGDSQ12967 914 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 EIF2B5Q13144 721 aaKnown RBP12.13□□□□□ -0.47
TPM4-212ENST00000590180 ZNF211Q13398 564 aaPredicted RBP12.13□□□□□ -0.47
TPM4-212ENST00000590180 C1orf61Q13536 156 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 PDK1Q15118 436 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 KAZNQ674X7 775 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 ENPP7Q6UWV6 458 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 DHRS13Q6UX07 377 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 MFSD7Q6UXD7 560 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 NPNTQ6UXI9 565 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 RD3Q7Z3Z2 195 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 PLD5Q8N7P1 536 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 SPC24Q8NBT2 197 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 TPCN2Q8NHX9 752 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 LMX1AQ8TE12 382 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 BTN2A2Q8WVV5 523 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 APOOQ9BUR5 198 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 GOLPH3Q9H4A6 298 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 GPR27Q9NS67 375 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 SPASTQ9UBP0 616 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 KLF15Q9UIH9 416 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
TPM4-212ENST00000590180 EPG5Q9HCE0 2579 aa12.13□□□□□ -0.47
TPM4-212ENST00000590180 A0A0A6YYK5 440 aaPredicted RBP12.12□□□□□ -0.47
TPM4-212ENST00000590180 ZNF487B1APH4 448 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 KCNK1O00180 336 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 SCAMP1O15126 338 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 AQP9O43315 295 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 ZRANB2O95218 330 aaKnown RBP eCLIP12.12□□□□□ -0.47
TPM4-212ENST00000590180 HLA-DQB2P05538 268 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 PDHA1P08559 390 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 C1SP09871 688 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 PEX5P50542 639 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 HADHBP55084 474 aaKnown RBP12.12□□□□□ -0.47
TPM4-212ENST00000590180 ARHGEF7Q14155 803 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 TFDP2Q14188 446 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 FAM182AQ5T1J6 154 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 SLC9A4Q6AI14 798 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 B4GALNT4Q76KP1 1039 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 TMPRSS7Q7RTY8 843 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 DAAM2Q86T65 1068 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 VSIG1Q86XK7 387 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 HID1Q8IV36 788 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 PHACTR4Q8IZ21 702 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 RCOR2Q8IZ40 523 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 RBFAQ8N0V3 343 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 PLA2G15Q8NCC3 412 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 OR4C6Q8NH72 309 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 PIH1D2Q8WWB5 315 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 FATE1Q969F0 183 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 HDAC11Q96DB2 347 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 SCRN2Q96FV2 425 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 IL12RB2Q99665 862 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 BAG1Q99933 345 aaPredicted RBP12.12□□□□□ -0.47
TPM4-212ENST00000590180 SLC13A1Q9BZW2 595 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 TCEAL2Q9H3H9 227 aaPredicted RBP12.12□□□□□ -0.47
TPM4-212ENST00000590180 SEPT10Q9P0V9 454 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 AMACRQ9UHK6 382 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 CHKBQ9Y259 395 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
TPM4-212ENST00000590180 OR1A2Q9Y585 309 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 PCDHGA1Q9Y5H4 931 aa12.12□□□□□ -0.47
TPM4-212ENST00000590180 FAM221BA6H8Z2 402 aa12.11□□□□□ -0.47
TPM4-212ENST00000590180 GOLGA6CA6NDK9 693 aa12.11□□□□□ -0.47
TPM4-212ENST00000590180 GOLGA6BA6NDN3 693 aa12.11□□□□□ -0.47
TPM4-212ENST00000590180 RCCD1A6NED2 376 aa12.11□□□□□ -0.47
TPM4-212ENST00000590180 K7ESM1 405 aa12.11□□□□□ -0.47
TPM4-212ENST00000590180 CACNB4O00305 520 aaPredicted RBP12.11□□□□□ -0.47
TPM4-212ENST00000590180 PPP1R12AO14974 1030 aaPredicted RBP12.11□□□□□ -0.47
TPM4-212ENST00000590180 PSTPIP1O43586 416 aa12.11□□□□□ -0.47
TPM4-212ENST00000590180 CST8O60676 142 aa12.11□□□□□ -0.47
TPM4-212ENST00000590180 RFPL3O75679 317 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms