RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ARGLU1Q9NWB6 273 aaPredicted RBP8.04□□□□□ -1.12
SMAD4-209ENST00000589941 DDX43Q9NXZ2 648 aaKnown RBP8.04□□□□□ -1.12
SMAD4-209ENST00000589941 TBC1D14Q9P2M4 693 aa8.04□□□□□ -1.12
SMAD4-209ENST00000589941 U3KQA8 63 aa8.04□□□□□ -1.12
SMAD4-209ENST00000589941 PRAMEF25A6NGN4 478 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 ZNF839A8K0R7 811 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 TULP2O00295 520 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 DDX3XO00571 662 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 CPLX1O14810 134 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 DFNA5O60443 496 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 ADRB2P07550 413 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 ENO2P09104 434 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 ACADMP11310 421 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 ACO1P21399 889 aaKnown RBP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 CASRP41180 1078 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 MATR3P43243 847 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 PGFP49763 221 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 NXPH1P58417 271 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 TUBB4BP68371 445 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 SLC20A2Q08357 652 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 TAF10Q12962 218 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 KCNJ12Q14500 433 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 ZNF234Q14588 700 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 TMEM132DQ14C87 1099 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 DENND5BQ6ZUT9 1274 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 ZNF771Q7L3S4 317 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 APTXQ7Z2E3 356 aaKnown RBP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 CLEC14AQ86T13 490 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 SPATS2Q86XZ4 545 aaKnown RBP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 SPATA2LQ8IUW3 424 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 TC2NQ8N9U0 490 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 WASF1Q92558 559 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 MIB2Q96AX9 1013 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 OTUB2Q96DC9 234 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 CLIC6Q96NY7 704 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 PANX2Q96RD6 677 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 LHX5Q9H2C1 402 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 FOXP1Q9H334 677 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 DLL4Q9NR61 685 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 INTS7Q9NVH2 962 aaKnown RBP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 PSD3Q9NYI0 1048 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 THAP10Q9P2Z0 257 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 SERGEFQ9UGK8 458 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 FBXO2Q9UK22 296 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-209ENST00000589941 PPP2R2CQ9Y2T4 447 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 MRFAP1Q9Y605 127 aa8.03□□□□□ -1.12
SMAD4-209ENST00000589941 PCSK5Q92824 1860 aa8.02□□□□□ -1.12
SMAD4-209ENST00000589941 PRRC2CQ9Y520 2896 aaKnown RBP8.02□□□□□ -1.13
SMAD4-209ENST00000589941 KPNA7A9QM74 516 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 CLDN3O15551 220 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 XPOTO43592 962 aaKnown RBP8.02□□□□□ -1.13
SMAD4-209ENST00000589941 DEXIO95424 95 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 IL18BPO95998 194 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 ZNF28P17035 718 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 BDNFP23560 247 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 MAGEA11P43364 429 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 GLRBP48167 497 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 PDX1P52945 283 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 BCAT1P54687 386 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 IRF9Q00978 393 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 ISXQ2M1V0 245 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 FBLN7Q53RD9 439 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 CNNM4Q6P4Q7 775 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 SLC39A4Q6P5W5 647 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 DDX42Q86XP3 938 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMAD4-209ENST00000589941 CHST14Q8NCH0 376 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 TMEM161BQ8NDZ6 487 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 DLG3Q92796 817 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 MED15Q96RN5 788 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 NAA15Q9BXJ9 866 aaKnown RBP8.02□□□□□ -1.13
SMAD4-209ENST00000589941 LUC7LQ9NQ29 371 aaKnown RBP8.02□□□□□ -1.13
SMAD4-209ENST00000589941 UCKL1Q9NWZ5 548 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 GEMIN8Q9NWZ8 242 aaKnown RBP8.02□□□□□ -1.13
SMAD4-209ENST00000589941 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMAD4-209ENST00000589941 HOOK1Q9UJC3 728 aaKnown RBP8.02□□□□□ -1.13
SMAD4-209ENST00000589941 MAN1B1Q9UKM7 699 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 TMA7Q9Y2S6 64 aaKnown RBP8.02□□□□□ -1.13
SMAD4-209ENST00000589941 SH3BP1Q9Y3L3 701 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 ENTPD2Q9Y5L3 495 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 B3GALT1Q9Y5Z6 326 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 V9GYY5 206 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-209ENST00000589941 TACC2O95359 2948 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 ITIH6Q6UXX5 1313 aa8.02□□□□□ -1.13
SMAD4-209ENST00000589941 A0A1W2PPC4 97 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 TISP43B9A030 160 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 F8VP50 259 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 DVL2O14641 736 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 MAP2K7O14733 419 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 FFAR2O15552 330 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 MTSS1O43312 755 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 SYNCRIPO60506 623 aaKnown RBP8.01□□□□□ -1.13
SMAD4-209ENST00000589941 AGFG2O95081 481 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 CLDN1O95832 211 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 INHBBP09529 407 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 GIMD1P0DJR0 217 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 TGM2P21980 687 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 RBMS1P29558 406 aaKnown RBP8.01□□□□□ -1.13
SMAD4-209ENST00000589941 MC4RP32245 332 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 KCNC1P48547 511 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms