RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 IFNB1P01574 187 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 PRKCGP05129 697 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 C6P13671 934 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 ZNF30P17039 623 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 CD38P28907 300 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 STIP1P31948 543 aaKnown RBP11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 LIG3P49916 1009 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 CDK18Q07002 472 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 OVGP1Q12889 678 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 SNX1Q13596 522 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 CCNG2Q16589 344 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 TMEM52BQ4KMG9 183 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 ANKRD20A2Q5SQ80 823 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 ANKRD20A1Q5TYW2 823 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 ANKRD20A3Q5VUR7 823 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 SLC23A3Q6PIS1 610 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 IL27RAQ6UWB1 636 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 ALYREFQ86V81 257 aaKnown RBP11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 DCLK2Q8N568 766 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 FAM174AQ8TBP5 190 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 C1orf54Q8WWF1 131 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 KLK6Q92876 244 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 VOPP1Q96AW1 172 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 FCRL5Q96RD9 977 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 SRPK1Q96SB4 655 aaKnown RBP11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 EDEM2Q9BV94 578 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 SMOC1Q9H4F8 434 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 C10orf88Q9H8K7 445 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 KCND1Q9NSA2 647 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 TMEM74BQ9NUR3 256 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 KCTD5Q9NXV2 234 aa11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 ZFR2Q9UPR6 939 aaKnown RBP11.93□□□□□ -0.5
SDHDP1-201ENST00000588055 A0A0J9YYE9 177 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 C5orf60A6NFR6 353 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 PATE3B3GLJ2 98 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 PSMD11O00231 422 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 SPINT1O43278 529 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 MT-CYBP00156 380 aaPredicted RBP11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 TRBC1P01850 177 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 ITGAVP06756 1048 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 MMP2P08253 660 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 CTPS1P17812 591 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 PSMB4P28070 264 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 CD68P34810 354 aaPredicted RBP11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 GALNT3Q14435 633 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 ACOX1Q15067 660 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 SF3A2Q15428 464 aaKnown RBP11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 HS1BP3Q53T59 392 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 DENND2CQ68D51 928 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 TCEAL6Q6IPX3 200 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 DRICH1Q6PGQ1 229 aaPredicted RBP11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 KDELC2Q7Z4H8 507 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 PTAR1Q7Z6K3 402 aaPredicted RBP11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 IQCHQ86VS3 1027 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 KIAA2013Q8IYS2 634 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 IPMKQ8NFU5 416 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 SPATA22Q8NHS9 363 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 CCDC110Q8TBZ0 833 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 CCHCR1Q8TD31 782 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 ASB12Q8WXK4 309 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 TCEAL3Q969E4 200 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 SCRN2Q96FV2 425 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 MCCC1Q96RQ3 725 aaPredicted RBP11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 MLPHQ9BV36 600 aaPredicted RBP11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 GTPBP2Q9BX10 602 aaKnown RBP11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 FZD3Q9NPG1 666 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 UBP1Q9NZI7 540 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 TTC7AQ9ULT0 858 aaPredicted RBP11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 ZFHX2Q9C0A1 2572 aaPredicted RBP11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 OTOGLQ3ZCN5 2332 aa11.92□□□□□ -0.5
SDHDP1-201ENST00000588055 SDK1Q7Z5N4 2213 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 TRPM6Q9BX84 2022 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 C1orf232A0A0U1RR37 186 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 LNP1A1A4G5 178 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 NPIPB15A6NHN6 443 aaPredicted RBP11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 A8MX80 341 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 E7EVH7 732 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 ARHGAP33O14559 1287 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 VILLO15195 856 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 FZD6O60353 706 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 HEXIM1O94992 359 aaKnown RBP11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 NDST3O95803 873 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 PAK4O96013 591 aaPredicted RBP11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 SLC4A1P02730 911 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 PDHA1P08559 390 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 ALPIP09923 528 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 ENGP17813 658 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 HLA-DPA1P20036 260 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 LMAN1P49257 510 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 CSNK1EP49674 416 aaKnown RBP11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 WNT3AP56704 352 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 ARHGAP8P85298 464 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 RALGDSQ12967 914 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 GRIK2Q13002 908 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 LRRC14Q15048 493 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 OASLQ15646 514 aaKnown RBP11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 CNGA3Q16281 694 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 LRRC66Q68CR7 880 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 LIPIQ6XZB0 460 aa11.91□□□□□ -0.5
SDHDP1-201ENST00000588055 KYAT3Q6YP21 454 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms