RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ATP8A1Q9Y2Q0 1164 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 TCRBV5S1A1TA0A578 114 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 J3KR12 359 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 EPHB6O15197 1021 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 WISP1O95388 367 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 PCCBP05166 539 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 JMJD7P0C870 316 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 LIPCP11150 499 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 HTR7P34969 479 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 CSNK1DP48730 415 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 NDST2P52849 883 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 TGIF1Q15583 401 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 LINC00303Q3SY05 128 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 CERCAMQ5T4B2 595 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 KCTD16Q68DU8 428 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 TAF8Q7Z7C8 310 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 ZSWIM9Q86XI8 627 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 Q8N9G6 341 aaPredicted RBP14.14□□□□□ -0.15
DNMT1-213ENST00000587604 EXD3Q8N9H8 876 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 PLA2G15Q8NCC3 412 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 FAM46DQ8NEK8 389 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 OR56A4Q8NGH8 313 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 ENOX1Q8TC92 643 aaKnown RBP14.14□□□□□ -0.15
DNMT1-213ENST00000587604 SGF29Q96ES7 293 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 PDXPQ96GD0 296 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 SEPT10Q9P0V9 454 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 LOXL2Q9Y4K0 774 aa14.14□□□□□ -0.15
DNMT1-213ENST00000587604 ANKRD62A6NC57 917 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 TMEM202A6NGA9 273 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 CACNB4O00305 520 aaPredicted RBP14.13□□□□□ -0.15
DNMT1-213ENST00000587604 TNFRSF10CO14798 259 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 PRAMEF11O60813 436 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 ITGB2P05107 769 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 TPM2P07951 284 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 HOXC4P09017 264 aaPredicted RBP14.13□□□□□ -0.15
DNMT1-213ENST00000587604 KRT10P13645 584 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 KELP23276 732 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 SERPINA4P29622 427 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 TRIM23P36406 574 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 KIAA1024LP59773 190 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 RPL7AP62424 266 aaKnown RBP14.13□□□□□ -0.15
DNMT1-213ENST00000587604 KRT31Q15323 416 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 SYCP1Q15431 976 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 FKBP15Q5T1M5 1219 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 CDKAL1Q5VV42 579 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 DNAJC24Q6P3W2 148 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 MON1BQ7L1V2 547 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 SRLQ86TD4 932 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 OR1E3Q8WZA6 343 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 FUBP1Q96AE4 644 aaKnown RBP14.13□□□□□ -0.15
DNMT1-213ENST00000587604 CMKLR1Q99788 373 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 CNPY3Q9BT09 278 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 NUP62CLQ9H1M0 184 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 ATP13A3Q9H7F0 1226 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 FGF22Q9HCT0 170 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 LRIT1Q9P2V4 623 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 SIK3Q9Y2K2 1263 aa14.13□□□□□ -0.15
DNMT1-213ENST00000587604 PYCARD-AS1I3L0S3 204 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 NUDT21O43809 227 aaKnown RBP14.12□□□□□ -0.15
DNMT1-213ENST00000587604 PALMO75781 387 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 RECQL5O94762 991 aaPredicted RBP14.12□□□□□ -0.15
DNMT1-213ENST00000587604 PRKCGP05129 697 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 RGRP47804 291 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 TPI1P60174 286 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 POLR2LP62875 67 aaKnown RBP14.12□□□□□ -0.15
DNMT1-213ENST00000587604 NSUN2Q08J23 767 aaKnown RBP eCLIP14.12□□□□□ -0.15
DNMT1-213ENST00000587604 RALGDSQ12967 914 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 NFATC3Q12968 1075 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 ARHGEF7Q14155 803 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 HLTFQ14527 1009 aaKnown RBP eCLIP14.12□□□□□ -0.15
DNMT1-213ENST00000587604 C14orf28Q4W4Y0 310 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 PPP1R15BQ5SWA1 713 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 AFMIDQ63HM1 303 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 LIPIQ6XZB0 460 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 SPRED1Q7Z699 444 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 TSEN2Q8NCE0 465 aaKnown RBP14.12□□□□□ -0.15
DNMT1-213ENST00000587604 ECHDC3Q96DC8 303 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 CELF6Q96J87 481 aaKnown RBP14.12□□□□□ -0.15
DNMT1-213ENST00000587604 MCEEQ96PE7 176 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 ARHGAP9Q9BRR9 750 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 FAM117AQ9C073 453 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 SLC39A8Q9C0K1 460 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 TMEM168Q9H0V1 697 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 DPEP2Q9H4A9 486 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 MRPL40Q9NQ50 206 aaKnown RBP14.12□□□□□ -0.15
DNMT1-213ENST00000587604 SEPT11Q9NVA2 429 aaKnown RBP14.12□□□□□ -0.15
DNMT1-213ENST00000587604 RNF215Q9Y6U7 377 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 PTPN13Q12923 2485 aa14.12□□□□□ -0.15
DNMT1-213ENST00000587604 PRAMEF33A0A0G2JMD5 474 aa14.11□□□□□ -0.15
DNMT1-213ENST00000587604 ARHGAP42A6NI28 874 aa14.11□□□□□ -0.15
DNMT1-213ENST00000587604 PRAMEF10O60809 474 aa14.11□□□□□ -0.15
DNMT1-213ENST00000587604 ELFN1P0C7U0 828 aa14.11□□□□□ -0.15
DNMT1-213ENST00000587604 DESP17661 470 aa14.11□□□□□ -0.15
DNMT1-213ENST00000587604 ITIH1P19827 911 aa14.11□□□□□ -0.15
DNMT1-213ENST00000587604 PAPOLAP51003 745 aaKnown RBP14.11□□□□□ -0.15
DNMT1-213ENST00000587604 BCL2L1Q07817 233 aa14.11□□□□□ -0.15
DNMT1-213ENST00000587604 SRSF6Q13247 344 aaKnown RBP14.11□□□□□ -0.15
DNMT1-213ENST00000587604 MANEAQ5SRI9 462 aa14.11□□□□□ -0.15
DNMT1-213ENST00000587604 DCUN1D2Q6PH85 259 aa14.11□□□□□ -0.15
DNMT1-213ENST00000587604 PRICKLE2Q7Z3G6 844 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms