RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SOCS5O75159 536 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 PAMP19021 973 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 CNTFP26441 200 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 GKP32189 559 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 ST8SIA6P61647 398 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 PDE1BQ01064 536 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 ZNF844Q08AG5 666 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 DMWDQ09019 674 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 ACCSLQ4AC99 568 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 SPANXN3Q5MJ09 141 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 ATXN7L2Q5T6C5 722 aaPredicted RBP12.73□□□□□ -0.37
VMP1-202ENST00000585847 LGSNQ5TDP6 509 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 AGBL2Q5U5Z8 902 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 STEAP4Q687X5 459 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 DPY19L3Q6ZPD9 716 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 ZNF534Q76KX8 674 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 TAOK1Q7L7X3 1001 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 DGLUCYQ7Z3D6 616 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 PRUNE1Q86TP1 453 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 LMNTD2Q8IXW0 634 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 PCDH20Q8N6Y1 951 aaKnown RBP12.73□□□□□ -0.37
VMP1-202ENST00000585847 FBXO36Q8NEA4 188 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 OR2T3Q8NH03 318 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 EXOC2Q96KP1 924 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 GDAP1L1Q96MZ0 367 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 HHIPQ96QV1 700 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 TUBGCP5Q96RT8 1024 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 RANBP9Q96S59 729 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 ADGRE3Q9BY15 652 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 TM6SF2Q9BZW4 377 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 MKRN2Q9H000 416 aaKnown RBP12.73□□□□□ -0.37
VMP1-202ENST00000585847 EPB41L4BQ9H329 900 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 NT5MQ9NPB1 228 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 LGALS13Q9UHV8 139 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 SARDHQ9UL12 918 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 NFS1Q9Y697 457 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 PLXND1Q9Y4D7 1925 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 EXOC1LA0A1B0GW35 172 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 RASGRF2O14827 1237 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 ATG13O75143 517 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 USP1O94782 785 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 ACSL3O95573 720 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 GSRP00390 522 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 AGTP01019 485 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 GABRG2P18507 467 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 ADRA1AP35348 466 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 NNMTP40261 264 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 CXCL12P48061 93 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 METAP1P53582 386 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 MAXP61244 160 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 NUMA1Q14980 2115 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 KYNUQ16719 465 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 KRT71Q3SY84 523 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 CARD16Q5EG05 197 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 CEP85LQ5SZL2 805 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 FAXCQ5TGI0 409 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 TSSK4Q6SA08 328 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 RANBP10Q6VN20 620 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 RASSF3Q86WH2 238 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 PPHLN1Q8NEY8 458 aaKnown RBP12.72□□□□□ -0.37
VMP1-202ENST00000585847 OR2AP1Q8NGE2 309 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 OR6K2Q8NGY2 324 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 OXNAD1Q96HP4 312 aaPredicted RBP12.72□□□□□ -0.37
VMP1-202ENST00000585847 SIGLEC10Q96LC7 697 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 MLPHQ9BV36 600 aaPredicted RBP12.72□□□□□ -0.37
VMP1-202ENST00000585847 CEP41Q9BYV8 373 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 RSPH9Q9H1X1 276 aaPredicted RBP12.72□□□□□ -0.37
VMP1-202ENST00000585847 VPS37BQ9H9H4 285 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 LRRC4CQ9HCJ2 640 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 CD93Q9NPY3 652 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 SPATA6Q9NWH7 488 aaPredicted RBP12.72□□□□□ -0.37
VMP1-202ENST00000585847 HACD3Q9P035 362 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 ZNF180Q9UJW8 692 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 TTLL3Q9Y4R7 772 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 ACTL7BQ9Y614 415 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 IKBKGQ9Y6K9 419 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 WASF2Q9Y6W5 498 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 CACNA1AO00555 2505 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 DCHS1Q96JQ0 3298 aa12.72□□□□□ -0.37
VMP1-202ENST00000585847 FANCMQ8IYD8 2048 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 LOC285095A0A1B0GVY8 99 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 TCRBV7S3A2A0A539 114 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 TCRBV21S2A2A0A5A6 115 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 HEATR9A2RTY3 570 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 GOLGA8MH3BSY2 632 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 ALDH1A2O94788 518 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 IGSF6O95976 241 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 MMP2P08253 660 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 NDUFV2P19404 249 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 ELK3P41970 407 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 CCR3P51677 355 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 CCNHP51946 323 aaPredicted RBP12.71□□□□□ -0.37
VMP1-202ENST00000585847 WNT3AP56704 352 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 RHOAP61586 193 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 RPS14P62263 151 aaKnown RBP12.71□□□□□ -0.37
VMP1-202ENST00000585847 RAD51Q06609 339 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 NIPAL4Q0D2K0 466 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 KCTD19Q17RG1 926 aaPredicted RBP12.71□□□□□ -0.37
VMP1-202ENST00000585847 PCID2Q5JVF3 399 aa12.71□□□□□ -0.37
VMP1-202ENST00000585847 FNBP1LQ5T0N5 605 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms