RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SPOCK2Q92563 424 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 FGF13Q92913 245 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 RBBP8Q99708 897 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 PAIP2Q9BPZ3 127 aaKnown RBP10.46□□□□□ -0.73
LIG3-203ENST00000585370 C19orf43Q9BQ61 176 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 PLCD4Q9BRC7 762 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 TRIM56Q9BRZ2 755 aaKnown RBP10.46□□□□□ -0.73
LIG3-203ENST00000585370 SLC2A11Q9BYW1 496 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 RHOJQ9H4E5 214 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 NOD2Q9HC29 1040 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 ARHGEF3Q9NR81 526 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 ABCB8Q9NUT2 735 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 HCFC1R1Q9NWW0 138 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 HACD3Q9P035 362 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 DLGAP2Q9P1A6 1054 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 CDH7Q9ULB5 785 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 RPL26L1Q9UNX3 145 aaKnown RBP10.46□□□□□ -0.73
LIG3-203ENST00000585370 PLLPQ9Y342 182 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 SIT1Q9Y3P8 196 aa10.46□□□□□ -0.73
LIG3-203ENST00000585370 GPR179Q6PRD1 2367 aa10.46□□□□□ -0.74
LIG3-203ENST00000585370 OTOGLQ3ZCN5 2332 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 HMX2A2RU54 273 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 MUSKO15146 869 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 BIRC5O15392 142 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 UGT1A9O60656 530 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 GLRA3O75311 464 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 PIAS1O75925 651 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 TMCC1O94876 653 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 ATXN1LP0C7T5 689 aaKnown RBP10.45□□□□□ -0.74
LIG3-203ENST00000585370 DHRS4L1P0CG22 281 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 GLULP15104 373 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 GJA1P17302 382 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 PSMA3P25788 255 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 MZF1P28698 734 aaPredicted RBP10.45□□□□□ -0.74
LIG3-203ENST00000585370 TYK2P29597 1187 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 CSKP41240 450 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 CCR2P41597 374 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 ARCN1P48444 511 aaKnown RBP10.45□□□□□ -0.74
LIG3-203ENST00000585370 SERPINB8P50452 374 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 ARF5P84085 180 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 ACVR1Q04771 509 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 SEPT6Q14141 434 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 LRRC14Q15048 493 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 CNGA3Q16281 694 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 FSCBQ5H9T9 825 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 NEPROQ6NW34 567 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 ESRP1Q6NXG1 681 aaKnown RBP10.45□□□□□ -0.74
LIG3-203ENST00000585370 NCEH1Q6PIU2 408 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 CCDC91Q7Z6B0 441 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 SRLQ86TD4 932 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 NDUFAF2Q8N183 169 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 ANKS4BQ8N8V4 417 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 RAB3IL1Q8TBN0 382 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 PTPRN2Q92932 1015 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 ISG20Q96AZ6 181 aaKnown RBP10.45□□□□□ -0.74
LIG3-203ENST00000585370 TCEAL4Q96EI5 215 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 TRIB3Q96RU7 358 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 FOXQ1Q9C009 403 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 FAM107BQ9H098 131 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 UGT1A7Q9HAW7 530 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 UGT1A10Q9HAW8 530 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 UGT1A8Q9HAW9 530 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 IARS2Q9NSE4 1012 aaKnown RBP10.45□□□□□ -0.74
LIG3-203ENST00000585370 VPS51Q9UID3 782 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 ANKRD6Q9Y2G4 727 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 MRPS23Q9Y3D9 190 aaKnown RBP10.45□□□□□ -0.74
LIG3-203ENST00000585370 DENND4CQ5VZ89 1909 aa10.45□□□□□ -0.74
LIG3-203ENST00000585370 CACNA1AO00555 2505 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 C2orf81A6NN90 581 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 TCP11X1B4DZS4 312 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 GOLGA8RI6L899 631 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 KLF11O14901 512 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 VAPBO95292 243 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 CD160O95971 181 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 PENKP01210 267 aaPredicted RBP10.44□□□□□ -0.74
LIG3-203ENST00000585370 COL6A2P12110 1019 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 TAC1P20366 129 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 ETV4P43268 484 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 MAGEA12P43365 314 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 CHRNA4P43681 627 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 STARD6P59095 220 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 RHOAP61586 193 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 LMAN2Q12907 356 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 USP4Q13107 963 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 GRM3Q14832 879 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 TAF1AQ15573 450 aaPredicted RBP10.44□□□□□ -0.74
LIG3-203ENST00000585370 ZNF77Q15935 545 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 PLEKHG6Q3KR16 790 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 CCDC153Q494R4 210 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 FSTL4Q6MZW2 842 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 KDELC2Q7Z4H8 507 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 PIGWQ7Z7B1 504 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 LRRC34Q8IZ02 419 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 UNC5BQ8IZJ1 945 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 CACNA2D3Q8IZS8 1091 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 CELF5Q8N6W0 485 aaKnown RBP10.44□□□□□ -0.74
LIG3-203ENST00000585370 C2CD4AQ8NCU7 369 aaPredicted RBP10.44□□□□□ -0.74
LIG3-203ENST00000585370 GPR150Q8NGU9 434 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 GDAP1Q8TB36 358 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 IRF7Q92985 503 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms