RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MRPL42Q9Y6G3 142 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 AK5Q9Y6K8 562 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 UBFD1O14562 309 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MRASO14807 208 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NRP2O60462 931 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CSPG5O95196 566 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PENKP01210 267 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 IMPDH1P20839 514 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ACADVLP49748 655 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SERPINH1P50454 418 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SAMD4BQ5PRF9 694 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 C6orf10Q5SRN2 563 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 AGMOQ6ZNB7 445 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 LARP4Q71RC2 724 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 LRRTM3Q86VH5 581 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CILP2Q8IUL8 1156 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 OR13J1Q8NGT2 312 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CASP10Q92851 521 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 OSBPL11Q9BXB4 747 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 OCEL1Q9H607 264 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MPP6Q9NZW5 540 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 GIT1Q9Y2X7 761 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 VWA7Q9Y334 891 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 RNF11Q9Y3C5 154 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 DNAH12Q6ZR08 3092 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CCDC160A6NGH7 325 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 E9PAM4 449 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PDLIM1O00151 329 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PAPSS2O95340 614 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 WISP3O95389 354 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PEX11BO96011 259 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CYP11A1P05108 521 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PGFP49763 221 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MRPS6P82932 125 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PABPC1LQ4VXU2 614 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 METTL23Q86XA0 190 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HERC6Q8IVU3 1022 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 IMP4Q96G21 291 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FLRT1Q9NZU1 646 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CROTQ9UKG9 612 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ARHGAP10A1A4S6 786 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TRPA1O75762 1119 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 YWHAQP27348 245 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SLC26A3P40879 764 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ATP4BP51164 291 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TMEM259Q4ZIN3 620 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CARM1Q86X55 608 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 KLHL23Q8NBE8 558 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 OR9I1Q8NGQ6 314 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 OR10T2Q8NGX3 314 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 L3HYPDHQ96EM0 354 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PARK7Q99497 189 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ATXN10Q9UBB4 475 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SNX13Q9Y5W8 968 aa14.25□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ARHGEF37A1IGU5 675 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 M0QZ92 97 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 B3GAT3O94766 335 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 KCNC1P48547 511 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NRG1Q02297 640 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 EML3Q32P44 896 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PAN2Q504Q3 1202 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ZNF678Q5SXM1 525 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 IRAK1BP1Q5VVH5 260 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CLEC6AQ6EIG7 209 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TMEM207Q6UWW9 146 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CYP2R1Q6VVX0 501 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 AMIGO2Q86SJ2 522 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 C14orf80Q86SX3 495 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ISCA2Q86U28 154 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PNPLA1Q8N8W4 532 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TMEM209Q96SK2 561 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NOL6Q9H6R4 1146 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 VPS45Q9NRW7 570 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FNIP2Q9P278 1114 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HS3ST4Q9Y661 456 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MIA3Q5JRA6 1907 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 WASH4PA8MWX3 477 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SLC7A4O43246 635 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SRP72O76094 671 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SUPT7LO94864 414 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 BRCC3P46736 316 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 RENBPP51606 427 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SLC5A3P53794 718 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MLLT6P55198 1093 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MTX3Q5HYI7 312 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MORN1Q5T089 497 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FUNDC1Q8IVP5 155 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SNX31Q8N9S9 440 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PBXIP1Q96AQ6 731 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SLC29A1Q99808 456 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 EFHD1Q9BUP0 239 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 AP5M1Q9H0R1 490 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ALG9Q9H6U8 611 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 IRAK4Q9NWZ3 460 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PATJQ8NI35 1801 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PTPRDP23468 1912 aa14.24□□□□□ -0.13
CDK5RAP3-237ENST00000585163 A0A1B0GTW7 788 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ATP6AP2A0A1C7CYW4 349 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MROH6A6NGR9 719 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ATP6AP2O75787 350 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms