RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CNNM3Q8NE01 707 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 TNIP2Q8NFZ5 429 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 MPLKIPQ8TAP9 179 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 CYP2W1Q8TAV3 490 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 APBB2Q92870 758 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 CCDC51Q96ER9 411 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 KAZALD1Q96I82 304 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 TIMP4Q99727 224 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SYT3Q9BQG1 590 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 TEX13BQ9BXU2 312 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 PABPC3Q9H361 631 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 USP29Q9HBJ7 922 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 GLOD4Q9HC38 313 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SEC63Q9UGP8 760 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 CORO1CQ9ULV4 474 aaPredicted RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 PCDHA10Q9Y5I2 948 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 ENTPD2Q9Y5L3 495 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SNX5Q9Y5X3 404 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 NFASCO94856 1347 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 FLT1P17948 1338 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SZT2Q5T011 3432 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 PRAMEF33A0A0G2JMD5 474 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 PRSS29PA6NIE9 313 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 YDJCA8MPS7 323 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC16A3O15427 465 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 HBP1O60381 514 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 PRAMEF10O60809 474 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC43A1O75387 559 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 CER1O95813 267 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SBK3P0C264 359 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 IRF1P10914 325 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 KCNA2P16389 499 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 RBL1P28749 1068 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 OAS2P29728 719 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 SFNP31947 248 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 TUBP50607 506 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 DGKQP52824 942 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 EIF3BP55884 814 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 WNT3P56703 355 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 RIPPLY3P57055 190 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 TBL3Q12788 808 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 ALCAMQ13740 583 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 FAM214AQ32MH5 1076 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 EDRF1Q3B7T1 1238 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 BEAN1Q3B7T3 259 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC9C2Q5TAH2 1124 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 ISM2Q6H9L7 571 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 Q6ZVL8 140 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 DNAJB7Q7Z6W7 309 aaPredicted RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 RPAINQ86UA6 219 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 XYLT1Q86Y38 959 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 FAM90A1Q86YD7 464 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 HACE1Q8IYU2 909 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 DCBLD1Q8N8Z6 715 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SRFBP1Q8NEF9 429 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 GSDMBQ8TAX9 411 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SPATA18Q8TC71 538 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 RFFLQ8WZ73 363 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SH3KBP1Q96B97 665 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 ERLEC1Q96DZ1 483 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 DAZAP1Q96EP5 407 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 SIPA1Q96FS4 1042 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 ZMAT2Q96NC0 199 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 RIOK1Q9BRS2 568 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 DDX23Q9BUQ8 820 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 RNF26Q9BY78 433 aaPredicted RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 TPSD1Q9BZJ3 242 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 CLPBQ9H078 707 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 RMI1Q9H9A7 625 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 CCDC177Q9NQR7 707 aaPredicted RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 GAR1Q9NY12 217 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 KCND2Q9NZV8 630 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 TBC1D29Q9UFV1 150 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SERTAD3Q9UJW9 196 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SSX2IPQ9Y2D8 614 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2□□□□□ -2.09
SMCHD1-211ENST00000584897 MRPS17Q9Y2R5 130 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 ZSCAN21Q9Y5A6 473 aaPredicted RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC4A4Q9Y6R1 1079 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 ELP1O95163 1332 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 TCF20Q9UGU0 1960 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 A0A087WWL8 130 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 CCL15-CCL14A0A0B4J2E2 113 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 CCDC195A0A1B0GUA6 201 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 AGAP5A6NIR3 686 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 SAC3D1A6NKF1 404 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 LRRC53A6NM62 1247 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 CXorf49A8MYA2 514 aaPredicted RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 CCP110O43303 1012 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 GPC4O75487 556 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 OAZ2O95190 189 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 BAG4O95429 457 aaKnown RBP2□□□□□ -2.09
SMCHD1-211ENST00000584897 IL1AP01583 271 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 DNTTP04053 509 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 ACTN1P12814 892 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 GJA1P17302 382 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 ICAM3P32942 547 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 KRT2P35908 639 aa2□□□□□ -2.09
SMCHD1-211ENST00000584897 VIPR2P41587 438 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms