RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 ADH1BP00325 375 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 POLBP06746 335 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 ABHD2P08910 425 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 C5AR1P21730 350 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 TARSP26639 723 aaKnown RBP12.06□□□□□ -0.48
CCDC57-216ENST00000582885 WASP42768 502 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 ZXDAP98168 799 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 SATB1Q01826 763 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 ZBTB16Q05516 673 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 POU6F1Q14863 301 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 TAF1AQ15573 450 aaPredicted RBP12.06□□□□□ -0.48
CCDC57-216ENST00000582885 KYNUQ16719 465 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 UGP2Q16851 508 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 TJAP1Q5JTD0 557 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 ZNF776Q68DI1 518 aaPredicted RBP12.06□□□□□ -0.48
CCDC57-216ENST00000582885 PKN3Q6P5Z2 889 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 ANKMY2Q8IV38 441 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 IGDCC3Q8IVU1 814 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 PALM2Q8IXS6 379 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 SIX5Q8N196 739 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 MPP5Q8N3R9 675 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 PAF1Q8N7H5 531 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 RAB7BQ96AH8 199 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 CLDN23Q96B33 292 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 C9orf72Q96LT7 481 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 HDAC8Q9BY41 377 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 LMAN1LQ9HAT1 526 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 LRRC4CQ9HCJ2 640 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 ZDHHC4Q9NPG8 344 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 PIH1D1Q9NWS0 290 aaKnown RBP12.06□□□□□ -0.48
CCDC57-216ENST00000582885 NINJ2Q9NZG7 142 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 MUTYHQ9UIF7 546 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 SARDHQ9UL12 918 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 CHMP2BQ9UQN3 213 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 TCAF1Q9Y4C2 921 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 MAD1L1Q9Y6D9 718 aa12.06□□□□□ -0.48
CCDC57-216ENST00000582885 FAM170BA6NMN3 283 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 C16orf96A6NNT2 1141 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 UPK3BL1B0FP48 263 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 UPK3BL2E5RIL1 263 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 KPNA3O00505 521 aaPredicted RBP12.05□□□□□ -0.48
CCDC57-216ENST00000582885 RIPK2O43353 540 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 IL1BP01584 269 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 TIMP2P16035 220 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 SLC8A1P32418 973 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 PHBP35232 272 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 HSD17B3P37058 310 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 RPS9P46781 194 aaKnown RBP12.05□□□□□ -0.48
CCDC57-216ENST00000582885 COPAP53621 1224 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 CRADDP78560 199 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 ACVR1Q04771 509 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 CCDC15Q0P6D6 951 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 MTM1Q13496 603 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 UBXN2BQ14CS0 331 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 CST6Q15828 149 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 CDKN3Q16667 212 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 ANKRD20A4Q4UJ75 823 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 SPANXN3Q5MJ09 141 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 HP1BP3Q5SSJ5 553 aaPredicted RBP12.05□□□□□ -0.48
CCDC57-216ENST00000582885 KIAA1211LQ6NV74 962 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 CASC4Q6P4E1 433 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 ZNF449Q6P9G9 518 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 USP45Q70EL2 814 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 SYT13Q7L8C5 426 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 MMAAQ8IVH4 418 aaKnown RBP12.05□□□□□ -0.48
CCDC57-216ENST00000582885 RAVER1Q8IY67 606 aaKnown RBP12.05□□□□□ -0.48
CCDC57-216ENST00000582885 FAM131CQ96AQ9 280 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 ARRDC3Q96B67 414 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 IER2Q9BTL4 223 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 EPB41L4BQ9H329 900 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 TBC1D17Q9HA65 648 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 DYRK4Q9NR20 520 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCDC57-216ENST00000582885 SPO11Q9Y5K1 396 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 FAM169AQ9Y6X4 670 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 EML5Q05BV3 1969 aa12.05□□□□□ -0.48
CCDC57-216ENST00000582885 C2orf81A6NN90 581 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 ALDH1A2O94788 518 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 NUDT17P0C025 328 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 CYP2A6P11509 494 aaPredicted RBP12.04□□□□□ -0.48
CCDC57-216ENST00000582885 ZNF30P17039 623 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 COL9A1P20849 921 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 LPOP22079 712 aaPredicted RBP12.04□□□□□ -0.48
CCDC57-216ENST00000582885 HNF1BP35680 557 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 HMGCLP35914 325 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 ABL2P42684 1182 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 NEK3P51956 506 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 GPX6P59796 221 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 RPS14P62263 151 aaKnown RBP12.04□□□□□ -0.48
CCDC57-216ENST00000582885 SIGLEC14Q08ET2 396 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 ELP6Q0PNE2 266 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 SFSWAPQ12872 951 aaKnown RBP12.04□□□□□ -0.48
CCDC57-216ENST00000582885 UAP1Q16222 522 aaPredicted RBP12.04□□□□□ -0.48
CCDC57-216ENST00000582885 CRY1Q16526 586 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 SKIDA1Q1XH10 827 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 TSTD2Q5T7W7 516 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 UNC5AQ6ZN44 842 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 C3orf62Q6ZUJ4 267 aa12.04□□□□□ -0.48
CCDC57-216ENST00000582885 ERN2Q76MJ5 926 aaKnown RBP12.04□□□□□ -0.48
CCDC57-216ENST00000582885 DPPA4Q7L190 304 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms