RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 RBM15Q96T37 977 aaKnown RBP eCLIP15.61■□□□□ 0.09
SS18-216ENST00000580751 TRIM51Q9BSJ1 452 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 PHACTR1Q9C0D0 580 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 FAM86C1Q9NVL1 165 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 FAM153AQ9UHL3 310 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 RPL26L1Q9UNX3 145 aaKnown RBP15.61■□□□□ 0.09
SS18-216ENST00000580751 SMG5Q9UPR3 1016 aaKnown RBP15.61■□□□□ 0.09
SS18-216ENST00000580751 SHOC2Q9UQ13 582 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 FADS3Q9Y5Q0 445 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 MYO15AQ9UKN7 3530 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 WDR87Q6ZQQ6 2873 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TBC1D3DA0A087WVF3 549 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TBC1D3IA0A087WXS9 549 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TBC1D3EA0A087X179 549 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TBC1D3KA0A087X1G2 549 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TBC1D3FA6NER0 549 aaPredicted RBP15.6■□□□□ 0.09
SS18-216ENST00000580751 ERI2A8K979 691 aaKnown RBP15.6■□□□□ 0.09
SS18-216ENST00000580751 MEI4A8MW99 385 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TBC1D3LB9A6J9 549 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 DNALI1O14645 258 aaPredicted RBP15.6■□□□□ 0.09
SS18-216ENST00000580751 AREL1O15033 823 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TSPAN6O43657 245 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 FZD6O60353 706 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TBC1D3HP0C7X1 549 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TIMP2P16035 220 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TNNT3P45378 269 aaPredicted RBP15.6■□□□□ 0.09
SS18-216ENST00000580751 RPL21P46778 160 aaKnown RBP15.6■□□□□ 0.09
SS18-216ENST00000580751 EPHB1P54762 984 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 GPS1Q13098 491 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 PRPSAP1Q14558 356 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 SYCP2LQ5T4T6 812 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 LYSMD4Q5XG99 296 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 KIAA0895LQ68EN5 471 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TBC1D3GQ6DHY5 549 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TBC1D3CQ6IPX1 549 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 EMBQ6PCB8 327 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 ZSWIM9Q86XI8 627 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TMEFF1Q8IYR6 380 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 TBC1D3Q8IZP1 549 aaPredicted RBP15.6■□□□□ 0.09
SS18-216ENST00000580751 ABCA7Q8IZY2 2146 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 ART4Q93070 314 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 LOXL4Q96JB6 756 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 HSPA12BQ96MM6 686 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 ADGRE3Q9BY15 652 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 C6orf106Q9H6K1 298 aaPredicted RBP15.6■□□□□ 0.09
SS18-216ENST00000580751 PCDH12Q9NPG4 1184 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 EIF2B3Q9NR50 452 aaKnown RBP15.6■□□□□ 0.09
SS18-216ENST00000580751 MTRF1LQ9UGC7 380 aaKnown RBP15.6■□□□□ 0.09
SS18-216ENST00000580751 PHTF1Q9UMS5 762 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 SNX24Q9Y343 169 aa15.6■□□□□ 0.09
SS18-216ENST00000580751 THADAQ6YHU6 1953 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 GOLGA6CA6NDK9 693 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 GOLGA6BA6NDN3 693 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 PRR23AA6NEV1 266 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 METTL12A8MUP2 240 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 PSMD3O43242 534 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 PMPCBO75439 489 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 PCDH8O95206 1070 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 MT-CYBP00156 380 aaPredicted RBP15.59■□□□□ 0.09
SS18-216ENST00000580751 GOLGA6DP0CG33 693 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 PSMB4P28070 264 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 DPP6P42658 865 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 GRIA4P48058 902 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 DHPSP49366 369 aaPredicted RBP15.59■□□□□ 0.09
SS18-216ENST00000580751 CCR5P51681 352 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 GEMP55040 296 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 VSNL1P62760 191 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 NHLH1Q02575 133 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 MPP3Q13368 585 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 SEMA5AQ13591 1074 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 IHHQ14623 411 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 LRRC73Q5JTD7 316 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 WDR45BQ5MNZ6 344 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 FAM182AQ5T1J6 154 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 LAIR1Q6GTX8 287 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 KIAA1161Q6NSJ0 714 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 PPP1R21Q6ZMI0 780 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 USP45Q70EL2 814 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 TRIM69Q86WT6 500 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 KLHDC8BQ8IXV7 354 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 PPIL6Q8IXY8 311 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 SPATA22Q8NHS9 363 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 IFT43Q96FT9 208 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 FEM1CQ96JP0 617 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 GOLGA6AQ9NYA3 693 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 GRHL1Q9NZI5 618 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 ANAPC5Q9UJX4 755 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 CHKBQ9Y259 395 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.59■□□□□ 0.09
SS18-216ENST00000580751 AAR2Q9Y312 384 aaKnown RBP15.59■□□□□ 0.09
SS18-216ENST00000580751 SDK1Q7Z5N4 2213 aa15.59■□□□□ 0.09
SS18-216ENST00000580751 DMDP11532 3685 aa15.58■□□□□ 0.09
SS18-216ENST00000580751 ZFHX2Q9C0A1 2572 aaPredicted RBP15.58■□□□□ 0.09
SS18-216ENST00000580751 C10orf142B7Z368 130 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 PROB1E7EW31 1015 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 AP3B1O00203 1094 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 SPINT1O43278 529 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 LATO43561 262 aa15.58■□□□□ 0.08
SS18-216ENST00000580751 RNGTTO60942 597 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms