RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-218	ENST00000580745	FCRL3	Q96P31	734 aa	Predicted RBP	11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	CSPG4P5	Q96PW8	444 aa		11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	LGR4	Q9BXB1	951 aa		11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	POLR1B	Q9H9Y6	1135 aa		11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	FGF22	Q9HCT0	170 aa		11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	DONSON	Q9NYP3	566 aa		11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	B4GALT6	Q9UBX8	382 aa		11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	KL	Q9UEF7	1012 aa		11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	GPR34	Q9UPC5	381 aa		11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	DOLK	Q9UPQ8	538 aa		11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	SCIN	Q9Y6U3	715 aa		11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	DOCK9	Q9BZ29	2069 aa		11.18	□□□□□ -0.62
PPP4R1-218	ENST00000580745	GOLGA4	Q13439	2230 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ITPR1	Q14643	2758 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745		A0A087X0T9	212 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	EIF3CL	B5ME19	914 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	MAFK	O60675	156 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	RASGRP1	O95267	797 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	MAP3K6	O95382	1288 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ELFN1	P0C7U0	828 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	FAM228B	P0C875	321 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	MYBL1	P10243	752 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	PCK1	P35558	622 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	LSS	P48449	732 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	PEX5	P50542	639 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	SLC25A11	Q02978	314 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	TRAF2	Q12933	501 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	MTM1	Q13496	603 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	RFTN1	Q14699	578 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ACOX1	Q15067	660 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ATP13A4	Q4VNC1	1196 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	TMCO4	Q5TGY1	634 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	DENND2C	Q68D51	928 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ESRP1	Q6NXG1	681 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	RBM44	Q6ZP01	1051 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	RFLNA	Q6ZTI6	216 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	DPPA4	Q7L190	304 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	B3GNT8	Q7Z7M8	397 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	PSTK	Q8IV42	348 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	PTCD2	Q8WV60	388 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	CCDC74A	Q96AQ1	378 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	PRR11	Q96HE9	360 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	WDR92	Q96MX6	357 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	PSKH2	Q96QS6	385 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	LGMN	Q99538	433 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	EIF3C	Q99613	913 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	NUP85	Q9BW27	656 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	NOD2	Q9HC29	1040 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	PCDH18	Q9HCL0	1135 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	MRPL47	Q9HD33	250 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ASCL3	Q9NQ33	180 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	EVA1B	Q9NVM1	165 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	SEPT3	Q9UH03	358 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	URB1	O60287	2271 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ADAMTS20	P59510	1910 aa		11.17	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745		A0A1W2PQM1	296 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	TMEM110-MUSTN1	A8MSY1	372 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	TOR1B	O14657	336 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	FUCA1	P04066	466 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	CTPS1	P17812	591 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	CR2	P20023	1033 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	LHCGR	P22888	699 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	IL4R	P24394	825 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	HTR1B	P28222	390 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	GJC1	P36383	396 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ARL4A	P40617	200 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	RPIA	P49247	311 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	BLK	P51451	505 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	AP1S1	P61966	158 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	CXADR	P78310	365 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	CCL7	P80098	99 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ZNF235	Q14590	738 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	IHH	Q14623	411 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	AGER	Q15109	404 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ELOC	Q15369	112 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	NFKBIB	Q15653	356 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	CNGA3	Q16281	694 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	BOLA3	Q53S33	107 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	FIGN	Q5HY92	759 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	TMCO3	Q6UWJ1	677 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	HSD11B1L	Q7Z5J1	315 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	TSPAN33	Q86UF1	283 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	SDR16C5	Q8N3Y7	309 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	FSTL5	Q8N475	847 aa	Predicted RBP	11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	LZTR1	Q8N653	840 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ARL10	Q8N8L6	244 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745		Q8N9G6	341 aa	Predicted RBP	11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	TRIM11	Q96F44	468 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	TBATA	Q96M53	351 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	ZNF578	Q96N58	590 aa	Predicted RBP	11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	FOXP3	Q9BZS1	431 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	TMEM168	Q9H0V1	697 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	CPNE5	Q9HCH3	593 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	NCKIPSD	Q9NZQ3	722 aa		11.16	□□□□□ -0.62
PPP4R1-218	ENST00000580745	MOSPD1	Q9UJG1	213 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms