RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 BTRCQ9Y297 605 aa6.07□□□□□ -1.44
CCDC178-209ENST00000579947 MEMO1Q9Y316 297 aa6.07□□□□□ -1.44
CCDC178-209ENST00000579947 NPHP3-ACAD11A0A0J9YXS1 232 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 CUTAO60888 179 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 IDEP14735 1019 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 MCM7P33993 719 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 KIAA1024LP59773 190 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 KYNUQ16719 465 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 WDR72Q3MJ13 1102 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 KCTD16Q68DU8 428 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 SKAP1Q86WV1 359 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 DNAAF3Q8N9W5 541 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 SAAL1Q96ER3 474 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 AHCYL2Q96HN2 611 aaKnown RBP6.06□□□□□ -1.44
CCDC178-209ENST00000579947 FCRL4Q96PJ5 515 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 NEUROD4Q9HD90 331 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 BEX4Q9NWD9 120 aaPredicted RBP6.06□□□□□ -1.44
CCDC178-209ENST00000579947 SLCO2B1O94956 709 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 PDGFRAP16234 1089 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 GARTP22102 1010 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 MSX1P28360 303 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 ADORA2BP29275 332 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 ATICP31939 592 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 BIRC2Q13490 618 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 TSR1Q2NL82 804 aaKnown RBP6.06□□□□□ -1.44
CCDC178-209ENST00000579947 TRAPPC11Q7Z392 1133 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 GALNT16Q8N428 558 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 MYCT1Q8N699 235 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 CHST14Q8NCH0 376 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 ALG14Q96F25 216 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 TMEM168Q9H0V1 697 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 SMYD3Q9H7B4 428 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 ZBTB20Q9HC78 741 aaPredicted RBP6.06□□□□□ -1.44
CCDC178-209ENST00000579947 HS3ST2Q9Y278 367 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 CSAG2Q9Y5P2 127 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 WASF2Q9Y6W5 498 aa6.06□□□□□ -1.44
CCDC178-209ENST00000579947 BIRC6Q9NR09 4857 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 TNFRSF10CO14798 259 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 SLC26A4O43511 780 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 CD2BP2O95400 341 aaKnown RBP6.05□□□□□ -1.44
CCDC178-209ENST00000579947 IGHEP01854 428 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 SRCP12931 536 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 NKX6-1P78426 367 aaPredicted RBP6.05□□□□□ -1.44
CCDC178-209ENST00000579947 CBLBQ13191 982 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 MYBPHQ13203 477 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 ATP1A4Q13733 1029 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 SYCP1Q15431 976 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 C3AR1Q16581 482 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 ANKRD40Q6AI12 368 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 CYB5D1Q6P9G0 228 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 NRROSQ86YC3 692 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 IGSF22Q8N9C0 903 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 GRIN3AQ8TCU5 1115 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 RNF31Q96EP0 1072 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 UBXN6Q9BZV1 441 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 AMBRA1Q9C0C7 1298 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 IKZF4Q9H2S9 585 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 VRTNQ9H8Y1 702 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 PARVGQ9HBI0 331 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 SFMBT1Q9UHJ3 866 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 SH3BGRL2Q9UJC5 107 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 SLC30A1Q9Y6M5 507 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 BNIP3LO60238 219 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 LEFTY1O75610 366 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 TM7SF2O76062 418 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 UNC5CO95185 931 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 CST3P01034 146 aaPredicted RBP6.05□□□□□ -1.44
CCDC178-209ENST00000579947 CCNB1P14635 433 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 PEX6Q13608 980 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 RAB41Q5JT25 222 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 HYIQ5T013 277 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 MSANTD2Q6P1R3 559 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 BHLHA9Q7RTU4 235 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 ARMC2Q8NEN0 867 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 CCL4L1Q8NHW4 92 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 ROBO4Q8WZ75 1007 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 NACC2Q96BF6 587 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 OR6C1Q96RD1 312 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 PPP1R9BQ96SB3 815 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 REEP2Q9BRK0 252 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 ANKRD36A6QL64 1941 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 VPS13CQ709C8 3753 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 CPLX1O14810 134 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 STX6O43752 255 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 FAM13AO94988 1023 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 PTK2Q05397 1052 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 TFF3Q07654 80 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 SEPT7Q16181 437 aaKnown RBP6.05□□□□□ -1.44
CCDC178-209ENST00000579947 KRT79Q5XKE5 535 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 PM20D1Q6GTS8 502 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 CPLX2Q6PUV4 134 aaKnown RBP6.05□□□□□ -1.44
CCDC178-209ENST00000579947 Q6ZPB1 254 aaPredicted RBP6.05□□□□□ -1.44
CCDC178-209ENST00000579947 UNC93AQ86WB7 457 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 RAB43Q86YS6 212 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 CFAP52Q8N1V2 620 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 OR56A4Q8NGH8 313 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 DNAJB14Q8TBM8 379 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 RNF139Q8WU17 664 aa6.05□□□□□ -1.44
CCDC178-209ENST00000579947 SCARF2Q96GP6 870 aaPredicted RBP6.05□□□□□ -1.44
CCDC178-209ENST00000579947 GSDMCQ9BYG8 508 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms