RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 PRORYQ9H606 182 aa13.8□□□□□ -0.2
GGA3-208ENST00000579743 MYO1AQ9UBC5 1043 aa13.8□□□□□ -0.2
GGA3-208ENST00000579743 CXADRP78310 365 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 TLE3Q04726 772 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 C19orf57Q0VDD7 668 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 PEX6Q13608 980 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 ACOX1Q15067 660 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 IGF2-ASQ6U949 168 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 ZNF571Q7Z3V5 609 aaPredicted RBP13.79□□□□□ -0.2
GGA3-208ENST00000579743 SPACA3Q8IXA5 215 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 OR56A4Q8NGH8 313 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 NAF1Q96HR8 494 aaKnown RBP13.79□□□□□ -0.2
GGA3-208ENST00000579743 PSKH2Q96QS6 385 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 CCDC3Q9BQI4 270 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 SYT11Q9BT88 431 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 TCEAL2Q9H3H9 227 aaPredicted RBP13.79□□□□□ -0.2
GGA3-208ENST00000579743 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.79□□□□□ -0.2
GGA3-208ENST00000579743 SIRPGQ9P1W8 387 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 SATB2Q9UPW6 733 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 OR1A2Q9Y585 309 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 PCDHGA8Q9Y5G5 932 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 DMXL2Q8TDJ6 3036 aa13.79□□□□□ -0.2
GGA3-208ENST00000579743 CCDC187A0A096LP49 1063 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 A0A1B0GTH6 734 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 TNFRSF10CO14798 259 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 ATXN7O15265 892 aaPredicted RBP13.78□□□□□ -0.2
GGA3-208ENST00000579743 BUB1BO60566 1050 aaPredicted RBP13.78□□□□□ -0.2
GGA3-208ENST00000579743 LRCH4O75427 683 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 RECQL5O94762 991 aaPredicted RBP13.78□□□□□ -0.2
GGA3-208ENST00000579743 CYP2A6P11509 494 aaPredicted RBP13.78□□□□□ -0.2
GGA3-208ENST00000579743 KIAA1024LP59773 190 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 EIF3IQ13347 325 aaKnown RBP13.78□□□□□ -0.2
GGA3-208ENST00000579743 CA9Q16790 459 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 HADHQ16836 314 aaKnown RBP13.78□□□□□ -0.2
GGA3-208ENST00000579743 ALG11Q2TAA5 492 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 FIGNQ5HY92 759 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 RALGPS1Q5JS13 557 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 AFMIDQ63HM1 303 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 CAVIN1Q6NZI2 390 aaKnown RBP13.78□□□□□ -0.2
GGA3-208ENST00000579743 FOXR1Q6PIV2 292 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 CRTC1Q6UUV9 634 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 TAF8Q7Z7C8 310 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 LRRC49Q8IUZ0 686 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 PCDH19Q8TAB3 1148 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 PDCD6IPQ8WUM4 868 aaKnown RBP13.78□□□□□ -0.2
GGA3-208ENST00000579743 HSPH1Q92598 858 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 VOPP1Q96AW1 172 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 ATXN7L3BQ96GX2 97 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 HIC2Q96JB3 615 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 TMEM74Q96NL1 305 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 SLC46A1Q96NT5 459 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 GFM1Q96RP9 751 aaKnown RBP13.78□□□□□ -0.2
GGA3-208ENST00000579743 CLPBQ9H078 707 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 WDR26Q9H7D7 661 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 CWC15Q9P013 229 aaKnown RBP13.78□□□□□ -0.2
GGA3-208ENST00000579743 TMEM63CQ9P1W3 806 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 IP6K2Q9UHH9 426 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 MOSPD1Q9UJG1 213 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 DGKBQ9Y6T7 804 aa13.78□□□□□ -0.2
GGA3-208ENST00000579743 GOLGA6L19H0YKK7 550 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 DDX3XO00571 662 aaKnown RBP eCLIP13.77□□□□□ -0.21
GGA3-208ENST00000579743 ZZEF1O43149 2961 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 KLK10O43240 276 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 SOCS5O75159 536 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 HOXC4P09017 264 aaPredicted RBP13.77□□□□□ -0.21
GGA3-208ENST00000579743 CDH6P55285 790 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 RHDQ02161 417 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 BIRC2Q13490 618 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 ARHGEF7Q14155 803 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 KRT81Q14533 505 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 NFKBIBQ15653 356 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 DPYSL2Q16555 572 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 PERM1Q5SV97 790 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 MARC1Q5VT66 337 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 LIPIQ6XZB0 460 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 DPPA4Q7L190 304 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 ARHGAP12Q8IWW6 846 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 ATPAF2Q8N5M1 289 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 FAM46DQ8NEK8 389 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 KIAA1524Q8TCG1 905 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 TEKT4Q8WW24 435 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 SLC39A7Q92504 469 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 SYN2Q92777 582 aaPredicted RBP13.77□□□□□ -0.21
GGA3-208ENST00000579743 ECHDC3Q96DC8 303 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 CRELD1Q96HD1 420 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 PEBP4Q96S96 227 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 RBM15Q96T37 977 aaKnown RBP eCLIP13.77□□□□□ -0.21
GGA3-208ENST00000579743 ISCUQ9H1K1 167 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 PHPT1Q9NRX4 125 aaPredicted RBP13.77□□□□□ -0.21
GGA3-208ENST00000579743 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.77□□□□□ -0.21
GGA3-208ENST00000579743 ENTPD2Q9Y5L3 495 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 RAI2Q9Y5P3 530 aa13.77□□□□□ -0.21
GGA3-208ENST00000579743 DSPP15924 2871 aaKnown RBP13.77□□□□□ -0.21
GGA3-208ENST00000579743 MYO1FO00160 1098 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 CPP00450 1065 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 TPM3P06753 285 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 SKILP12757 684 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 SSR1P43307 286 aaKnown RBP13.76□□□□□ -0.21
GGA3-208ENST00000579743 RGRP47804 291 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 DPYSQ14117 519 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms