RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 FAM3CQ92520 227 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 EZH1Q92800 747 aaPredicted RBP8.09□□□□□ -1.11
COPS3-215ENST00000578317 PTPRN2Q92932 1015 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 VOPP1Q96AW1 172 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 OXNAD1Q96HP4 312 aaPredicted RBP8.09□□□□□ -1.11
COPS3-215ENST00000578317 SHDQ96IW2 340 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 LRIG1Q96JA1 1093 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 CNTNAP3BQ96NU0 1288 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 SEMA3CQ99985 751 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 GORASP1Q9BQQ3 440 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 TRIM56Q9BRZ2 755 aaKnown RBP8.09□□□□□ -1.11
COPS3-215ENST00000578317 PARD6BQ9BYG5 372 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 CNTNAP3Q9BZ76 1288 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 NOD2Q9HC29 1040 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 ZDHHC18Q9NUE0 388 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 ANAPC5Q9UJX4 755 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 SHOC2Q9UQ13 582 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 F5P12259 2224 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 DOCK4Q8N1I0 1966 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 A0A1W2PQ67 120 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 E7EVH7 732 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 TERTO14746 1132 aaKnown RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 SOCS5O75159 536 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 FBXO24O75426 580 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 IGSF6O95976 241 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 VSIG8P0DPA2 414 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 MLNP12872 115 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 ADRA1AP35348 466 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 RGRP47804 291 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 CARSP49589 748 aaKnown RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 SCNN1BP51168 640 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 ITGA8P53708 1063 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 PLTPP55058 493 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 MAXP61244 160 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 RPL26P61254 145 aaKnown RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 BASP1P80723 227 aaKnown RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 RAD51Q06609 339 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 ITKQ08881 620 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 GAS6Q14393 721 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 ZNF234Q14588 700 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 ACCSLQ4AC99 568 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 IZUMO3Q5VZ72 239 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 FSTL4Q6MZW2 842 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 C22orf39Q6P5X5 142 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 LRRC8BQ6P9F7 803 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 KDELC1Q6UW63 502 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 ZDHHC24Q6UX98 284 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 PPP1R21Q6ZMI0 780 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 TRMT11Q7Z4G4 463 aaKnown RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 SRLQ86TD4 932 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 LINC00523Q86TU6 105 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 SFTPA1Q8IWL2 248 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 SPATA22Q8NHS9 363 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 HCAR2Q8TDS4 363 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 GDAP1L1Q96MZ0 367 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 ZNF641Q96N77 438 aaPredicted RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 TUBGCP5Q96RT8 1024 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 MLPHQ9BV36 600 aaPredicted RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 TRIM31Q9BZY9 425 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 EPC1Q9H2F5 836 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 LRRC40Q9H9A6 602 aa8.08□□□□□ -1.12
COPS3-215ENST00000578317 HECAQ9UBI9 543 aaPredicted RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 ATXN7L1Q9ULK2 861 aaPredicted RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 RPL26L1Q9UNX3 145 aaKnown RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 MRPS17Q9Y2R5 130 aaKnown RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 HELZP42694 1942 aaKnown RBP8.08□□□□□ -1.12
COPS3-215ENST00000578317 EDDM13A0A1B0GTR0 161 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 TCRBV7S3A2A0A539 114 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 ESYT3A0FGR9 886 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 TTC34A8MYJ7 566 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 ALOX15BO15296 676 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 HTRA2O43464 458 aaPredicted RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 PPFIA2O75334 1257 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 MT-CYBP00156 380 aaPredicted RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 ECHS1P30084 290 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 NTSR1P30989 418 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 CD86P42081 329 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 MAGEA3P43357 314 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 RECQLP46063 649 aaPredicted RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 NUMBP49757 651 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 WNT3AP56704 352 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 DSC2Q02487 901 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 KDSRQ06136 332 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 CDK18Q07002 472 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 PON2Q15165 354 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 FAM182AQ5T1J6 154 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 C9orf64Q5T6V5 341 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 EMC10Q5UCC4 262 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 ANKRD22Q5VYY1 191 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 NAPEPLDQ6IQ20 393 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 SERPINA13PQ6UXR4 307 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 DPY19L3Q6ZPD9 716 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 CEP128Q6ZU80 1094 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 TPRG1Q6ZUI0 275 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 ZCCHC9Q8N567 271 aaKnown RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 FBXO25Q8TCJ0 367 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 IFT81Q8WYA0 676 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 PRCCQ92733 491 aaPredicted RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 SPACA7Q96KW9 195 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 NSMCE3Q96MG7 304 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms