RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 APRTP07741 180 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 CYP2A6P11509 494 aaPredicted RBP12.75□□□□□ -0.37
MKS1-206ENST00000577824 ZNF30P17039 623 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 LHCGRP22888 699 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 VIPR1P32241 457 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 CCR5P51681 352 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 EPHB1P54762 984 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 BASP1P80723 227 aaKnown RBP12.75□□□□□ -0.37
MKS1-206ENST00000577824 CREB5Q02930 508 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 GALNT3Q14435 633 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 TRIP13Q15645 432 aaPredicted RBP12.75□□□□□ -0.37
MKS1-206ENST00000577824 SIRPB2Q5JXA9 342 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 RNASEH2BQ5TBB1 312 aaKnown RBP12.75□□□□□ -0.37
MKS1-206ENST00000577824 PMS2CLQ68D20 193 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 ZNF534Q76KX8 674 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 TTC7BQ86TV6 843 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 HOOK3Q86VS8 718 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 NDUFAF2Q8N183 169 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 CBARPQ8N350 705 aaPredicted RBP12.75□□□□□ -0.37
MKS1-206ENST00000577824 FAM160A2Q8N612 972 aaPredicted RBP12.75□□□□□ -0.37
MKS1-206ENST00000577824 FRMD1Q8N878 549 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 NAT8LQ8N9F0 302 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 OR14C36Q8NHC7 312 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 ASB12Q8WXK4 309 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 SEC14L1Q92503 715 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 ZC3H10Q96K80 434 aaKnown RBP12.75□□□□□ -0.37
MKS1-206ENST00000577824 C19orf43Q9BQ61 176 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 FICDQ9BVA6 458 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 DUSP15Q9H1R2 295 aaPredicted RBP12.75□□□□□ -0.37
MKS1-206ENST00000577824 MAGEE1Q9HCI5 957 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 GGT7Q9UJ14 662 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 ITM2BQ9Y287 266 aa12.75□□□□□ -0.37
MKS1-206ENST00000577824 SCN8AQ9UQD0 1980 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 TNRC6BQ9UPQ9 1833 aaKnown RBP12.74□□□□□ -0.37
MKS1-206ENST00000577824 SMAPO00193 183 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 TP73O15350 636 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 HRO43593 1189 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 TMEM63AO94886 807 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 SEC31AO94979 1220 aaKnown RBP12.74□□□□□ -0.37
MKS1-206ENST00000577824 HEXIM1O94992 359 aaKnown RBP12.74□□□□□ -0.37
MKS1-206ENST00000577824 AGTP01019 485 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 IGHV4-34P06331 123 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 BCKDHBP21953 392 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 XPAP23025 273 aaPredicted RBP12.74□□□□□ -0.37
MKS1-206ENST00000577824 HNF1BP35680 557 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 NUDT1P36639 197 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 MAGEA3P43357 314 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 CHRNA4P43681 627 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 TNNT3P45378 269 aaPredicted RBP12.74□□□□□ -0.37
MKS1-206ENST00000577824 PPP2CBP62714 309 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 RPS21P63220 83 aaKnown RBP12.74□□□□□ -0.37
MKS1-206ENST00000577824 PPP2CAP67775 309 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 OLIG2Q13516 323 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 CNGA3Q16281 694 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 GLE1Q53GS7 698 aaKnown RBP12.74□□□□□ -0.37
MKS1-206ENST00000577824 LRRC73Q5JTD7 316 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 ARMC3Q5W041 872 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 DUPD1Q68J44 220 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 C8orf74Q6P047 294 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 ZC3H14Q6PJT7 736 aaKnown RBP12.74□□□□□ -0.37
MKS1-206ENST00000577824 PCGF5Q86SE9 256 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 FAM124AQ86V42 546 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 PPIL6Q8IXY8 311 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 NOA1Q8NC60 698 aaKnown RBP12.74□□□□□ -0.37
MKS1-206ENST00000577824 MCUQ8NE86 351 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 GANCQ8TET4 914 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 ERP44Q9BS26 406 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 TRIM51Q9BSJ1 452 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 EPC1Q9H2F5 836 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 TRABDQ9H4I3 376 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 CASS4Q9NQ75 786 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 HACD3Q9P035 362 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 NFKBIL1Q9UBC1 381 aaPredicted RBP12.74□□□□□ -0.37
MKS1-206ENST00000577824 ASIC3Q9UHC3 531 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 ZFR2Q9UPR6 939 aaKnown RBP12.74□□□□□ -0.37
MKS1-206ENST00000577824 SHOC2Q9UQ13 582 aa12.74□□□□□ -0.37
MKS1-206ENST00000577824 CACNA1HO95180 2353 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 E7EVH7 732 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 AP3B1O00203 1094 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 NDC80O14777 642 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 USP12O75317 370 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 PRKCGP05129 697 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 ALPIP09923 528 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 MLNP12872 115 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 GM2AP17900 193 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 VPS41P49754 854 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 PTPN5P54829 565 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 CDH17Q12864 832 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 CBLBQ13191 982 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 MORF4L2Q15014 288 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 KCTD19Q17RG1 926 aaPredicted RBP12.73□□□□□ -0.37
MKS1-206ENST00000577824 ZNF284Q2VY69 593 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 PLK5Q496M5 336 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 DNTTIP2Q5QJE6 756 aaKnown RBP12.73□□□□□ -0.37
MKS1-206ENST00000577824 ANKRD22Q5VYY1 191 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 KIAA0895LQ68EN5 471 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 CCDC70Q6NSX1 233 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 CRTC1Q6UUV9 634 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 LIPIQ6XZB0 460 aa12.73□□□□□ -0.37
MKS1-206ENST00000577824 HORMAD1Q86X24 394 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms