RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FTSJ1Q9UET6 329 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 VPS28Q9UK41 221 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 ACTL7AQ9Y615 435 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 DMXL2Q8TDJ6 3036 aa6.37□□□□□ -1.39
NUP88-212ENST00000576708 NYNRINQ9P2P1 1898 aaKnown RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 A0A0D9SEW6 157 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 GTPBP10A4D1E9 387 aaKnown RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 GOLGA8SH3BPF8 625 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 TLR4O00206 839 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 SLC31A1O15431 190 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 LATO43561 262 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 PLRG1O43660 514 aaKnown RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 SIGLEC6O43699 453 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 LDOC1O95751 146 aaPredicted RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 RHOCP08134 193 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 SLC2A3P11169 496 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 SRCP12931 536 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 MYF5P13349 255 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 PRLRP16471 622 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 CD247P20963 164 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 RRM1P23921 792 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 EPHA8P29322 1005 aaPredicted RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 CXCR3P49682 368 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 SULT1E1P49888 294 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 TAS2R38P59533 333 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 UBE2HP62256 183 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 DEUP1Q05D60 604 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 SULT2A1Q06520 285 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 RAPGEF1Q13905 1077 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 DRAP1Q14919 205 aaPredicted RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 SMAD1Q15797 465 aaKnown RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 MAN2A1Q16706 1144 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 TPD52L1Q16890 204 aaPredicted RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 DPCR1Q3MIW9 517 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 C5orf22Q49AR2 442 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 VWA3BQ502W6 1294 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 MIIPQ5JXC2 388 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 AGBL4Q5VU57 503 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 MRM1Q6IN84 353 aaKnown RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 NAPEPLDQ6IQ20 393 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 SLC26A9Q7LBE3 791 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 KANSL1Q7Z3B3 1105 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 THAP5Q7Z6K1 395 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 TFAP2DQ7Z6R9 452 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 PRPF39Q86UA1 669 aaKnown RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 TSPYL5Q86VY4 417 aaPredicted RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 CREG2Q8IUH2 290 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 TP53INP2Q8IXH6 220 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 FAM71AQ8IYT1 594 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 SH2D3CQ8N5H7 860 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 ADCY4Q8NFM4 1077 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 OR7D4Q8NG98 312 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 OR8D1Q8WZ84 308 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 FAM131CQ96AQ9 280 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 LRIG1Q96JA1 1093 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 SPAG5Q96R06 1193 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 MAGEB5Q9BZ81 275 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 PDCL3Q9H2J4 239 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 WDCPQ9H6R7 721 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 SYNCQ9H7C4 482 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 CARS2Q9HA77 564 aaKnown RBP6.36□□□□□ -1.39
NUP88-212ENST00000576708 GP6Q9HCN6 339 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 FZD3Q9NPG1 666 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 ARHGEF38Q9NXL2 777 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.36□□□□□ -1.39
NUP88-212ENST00000576708 VPS51Q9UID3 782 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 SLC25A13Q9UJS0 675 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 TBC1D30Q9Y2I9 924 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 FHOD1Q9Y613 1164 aa6.36□□□□□ -1.39
NUP88-212ENST00000576708 FREM2Q5SZK8 3169 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 TP53BP1Q12888 1972 aaPredicted RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 ADAMTS20P59510 1910 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 A0A1W2PQU0 124 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 DRGXA6NNA5 263 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 C1QTNF3-AMACRE9PGA6 284 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 KPNA3O00505 521 aaPredicted RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 PES1O00541 588 aaKnown RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 TRIM38O00635 465 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 MCF2LO15068 1137 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 DFNA5O60443 496 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 SRGAP2O75044 1071 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 CLDN11O75508 207 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 ESR1P03372 595 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 MMEP08473 750 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 CYP11B1P15538 503 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 CHRNA3P32297 505 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 FLT3P36888 993 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 ACADVLP49748 655 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 KLK7P49862 253 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 CDH4P55283 916 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 CLDN2P57739 230 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 STAT4Q14765 748 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 NCAPHQ15003 741 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 SOWAHCQ53LP3 525 aaPredicted RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 ANKRD39Q53RE8 183 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 ZNF542PQ5EBM4 170 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 FAM102AQ5T9C2 384 aaPredicted RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 PIP5KL1Q5T9C9 394 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 KLHDC7AQ5VTJ3 777 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 FAM46CQ5VWP2 391 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms