RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 SCRN2Q96FV2 425 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 HSPA12BQ96MM6 686 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 FICDQ9BVA6 458 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 ETNK1Q9HBU6 452 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 RAB6BQ9NRW1 208 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 B4GALT6Q9UBX8 382 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 PCYOX1Q9UHG3 505 aa14.05□□□□□ -0.16
RPAIN-217ENST00000575711 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.05□□□□□ -0.16
RPAIN-217ENST00000575711 PLXND1Q9Y4D7 1925 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 CAPN8A6NHC0 703 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 IGHV4-34P06331 123 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 ALPIP09923 528 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 HLA-DPA1P20036 260 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 VIPR1P32241 457 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 PTGER3P43115 390 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 LMAN1P49257 510 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 VPS41P49754 854 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 BASP1P80723 227 aaKnown RBP14.04□□□□□ -0.16
RPAIN-217ENST00000575711 SEMG2Q02383 582 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 SEMA5AQ13591 1074 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 PPP1R7Q15435 360 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 TRIP13Q15645 432 aaPredicted RBP14.04□□□□□ -0.16
RPAIN-217ENST00000575711 LPAL2Q16609 132 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 WDR45BQ5MNZ6 344 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 SLC41A1Q8IVJ1 513 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 KLHDC8BQ8IXV7 354 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 RGL4Q8IZJ4 473 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 PDCD7Q8N8D1 485 aaKnown RBP14.04□□□□□ -0.16
RPAIN-217ENST00000575711 SLCO2A1Q92959 643 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 BIRC7Q96CA5 298 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 MCCC1Q96RQ3 725 aaPredicted RBP14.04□□□□□ -0.16
RPAIN-217ENST00000575711 WRAP53Q9BUR4 548 aaKnown RBP14.04□□□□□ -0.16
RPAIN-217ENST00000575711 LRRC40Q9H9A6 602 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 SMG5Q9UPR3 1016 aaKnown RBP14.04□□□□□ -0.16
RPAIN-217ENST00000575711 MRFAP1Q9Y605 127 aa14.04□□□□□ -0.16
RPAIN-217ENST00000575711 EML5Q05BV3 1969 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 WDFY4Q6ZS81 3184 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 NPIPB15A6NHN6 443 aaPredicted RBP14.03□□□□□ -0.16
RPAIN-217ENST00000575711 ERI2A8K979 691 aaKnown RBP14.03□□□□□ -0.16
RPAIN-217ENST00000575711 A8MX80 341 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 ESPNB1AK53 854 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 C10orf142B7Z368 130 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 LATO43561 262 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 TM7SF2O76062 418 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 AP2A1O95782 977 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 AGTP01019 485 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 FGF1P05230 155 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 ATXN1LP0C7T5 689 aaKnown RBP14.03□□□□□ -0.16
RPAIN-217ENST00000575711 ELFN1P0C7U0 828 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 MAT2AP31153 395 aaKnown RBP14.03□□□□□ -0.16
RPAIN-217ENST00000575711 HNF1BP35680 557 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 NUDT1P36639 197 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 LIG3P49916 1009 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 DR1Q01658 176 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 RALGDSQ12967 914 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 GPS1Q13098 491 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 SGCGQ13326 291 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 ARHGEF7Q14155 803 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 SLC1A5Q15758 541 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 SETMARQ53H47 684 aaPredicted RBP14.03□□□□□ -0.16
RPAIN-217ENST00000575711 SIRPB2Q5JXA9 342 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 SEL1L3Q68CR1 1132 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 KCTD11Q693B1 232 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 LAIR1Q6GTX8 287 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 NAPEPLDQ6IQ20 393 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 SYDE1Q6ZW31 735 aaPredicted RBP14.03□□□□□ -0.16
RPAIN-217ENST00000575711 ZNF572Q7Z3I7 529 aaPredicted RBP14.03□□□□□ -0.16
RPAIN-217ENST00000575711 SLC25A41Q8N5S1 370 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 CCHCR1Q8TD31 782 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 LOXL4Q96JB6 756 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 LYSMD1Q96S90 227 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 SRPK1Q96SB4 655 aaKnown RBP14.03□□□□□ -0.16
RPAIN-217ENST00000575711 KRT12Q99456 494 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 TBL1YQ9BQ87 522 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 ZFR2Q9UPR6 939 aaKnown RBP14.03□□□□□ -0.16
RPAIN-217ENST00000575711 DMTF1Q9Y222 760 aa14.03□□□□□ -0.16
RPAIN-217ENST00000575711 ANKRD36A6QL64 1941 aa14.02□□□□□ -0.16
RPAIN-217ENST00000575711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.02□□□□□ -0.17
RPAIN-217ENST00000575711 A0A1W2PPC4 97 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 IGLON5A6NGN9 336 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 LZTS3O60299 673 aaPredicted RBP14.02□□□□□ -0.17
RPAIN-217ENST00000575711 ZNF500O60304 480 aaPredicted RBP14.02□□□□□ -0.17
RPAIN-217ENST00000575711 MMP20O60882 483 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 HEXIM1O94992 359 aaKnown RBP14.02□□□□□ -0.17
RPAIN-217ENST00000575711 APRTP07741 180 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 C6P13671 934 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 ZNF30P17039 623 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 LHCGRP22888 699 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 CD27P26842 260 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 ADRA1AP35348 466 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 DPP6P42658 865 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 CHRNA4P43681 627 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 C2orf54Q08AI8 447 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 DHX34Q14147 1143 aaKnown RBP14.02□□□□□ -0.17
RPAIN-217ENST00000575711 SPARCL1Q14515 664 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 CNGA3Q16281 694 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 ZNF284Q2VY69 593 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 TMEM259Q4ZIN3 620 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 CRTC1Q6UUV9 634 aa14.02□□□□□ -0.17
RPAIN-217ENST00000575711 RANBP10Q6VN20 620 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms