RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	FAM170B	A6NMN3	283 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	C2orf81	A6NN90	581 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	UPK3BL1	B0FP48	263 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	UPK3BL2	E5RIL1	263 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	KPNA3	O00505	521 aa	Predicted RBP	11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	RIPK2	O43353	540 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	BANF1	O75531	89 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	USP1	O94782	785 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	IL1B	P01584	269 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	ABHD2	P08910	425 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	CYP2A6	P11509	494 aa	Predicted RBP	11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	TIMP2	P16035	220 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	C5AR1	P21730	350 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	PSMA3	P25788	255 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	PHB	P35232	272 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	COPA	P53621	1224 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	SATB1	Q01826	763 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	SFSWAP	Q12872	951 aa	Known RBP	11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	FZD5	Q13467	585 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	POU6F1	Q14863	301 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	UBXN2B	Q14CS0	331 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	CST6	Q15828	149 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	SKIDA1	Q1XH10	827 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	ANKRD20A4	Q4UJ75	823 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	TJAP1	Q5JTD0	557 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	SPANXN3	Q5MJ09	141 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	ZNF449	Q6P9G9	518 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	C3orf62	Q6ZUJ4	267 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	SYT13	Q7L8C5	426 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	ZSWIM9	Q86XI8	627 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	MMAA	Q8IVH4	418 aa	Known RBP	11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	BLOC1S5	Q8TDH9	187 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	STYX	Q8WUJ0	223 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	RAB7B	Q96AH8	199 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	CLDN23	Q96B33	292 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	C9orf72	Q96LT7	481 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	WDR83	Q9BRX9	315 aa	Known RBP	11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	FUT8	Q9BYC5	575 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	CD320	Q9NPF0	282 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	ZDHHC4	Q9NPG8	344 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	CHRAC1	Q9NRG0	131 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	MUTYH	Q9UIF7	546 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	SARDH	Q9UL12	918 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116	FAM169A	Q9Y6X4	670 aa		11.95	□□□□□ -0.5
PRPF8-212	ENST00000575116		A0A087WUV0	522 aa	Predicted RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	LDB2	O43679	373 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	ZNF30	P17039	623 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	PAM	P19021	973 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	LPO	P22079	712 aa	Predicted RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	XPA	P23025	273 aa	Predicted RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	HNF1B	P35680	557 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	HMGCL	P35914	325 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	HSD17B3	P37058	310 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	ABL2	P42684	1182 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	RPS9	P46781	194 aa	Known RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	NEK3	P51956	506 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	GPX6	P59796	221 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	RPS14	P62263	151 aa	Known RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	CRADD	P78560	199 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	ACVR1	Q04771	509 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	ELP6	Q0PNE2	266 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	MTM1	Q13496	603 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	CRY1	Q16526	586 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	CDKN3	Q16667	212 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	TSTD2	Q5T7W7	516 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	DENND2C	Q68D51	928 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	KIAA1211L	Q6NV74	962 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	ERAP2	Q6P179	960 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	FBXL19	Q6PCT2	694 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	UNC5A	Q6ZN44	842 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	ERN2	Q76MJ5	926 aa	Known RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	HDX	Q7Z353	690 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	GLT6D1	Q7Z4J2	308 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	TTC7B	Q86TV6	843 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	RAVER1	Q8IY67	606 aa	Known RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	MDGA1	Q8NFP4	955 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	GSDMB	Q8TAX9	411 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	ARRDC3	Q96B67	414 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	IER2	Q9BTL4	223 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	TBC1D17	Q9HA65	648 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	POLM	Q9NP87	494 aa	Predicted RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	TREX1	Q9NSU2	369 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	NLE1	Q9NVX2	485 aa	Predicted RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	ZNF711	Q9Y462	761 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	MTF2	Q9Y483	593 aa	Predicted RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	SPO11	Q9Y5K1	396 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	RPS6KL1	Q9Y6S9	549 aa		11.94	□□□□□ -0.5
PRPF8-212	ENST00000575116	EYS	Q5T1H1	3165 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	ZCWPW2	A0A1B0GU75	182 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	ATP8B1	O43520	1251 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	ALDH1A2	O94788	518 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	NUDT17	P0C025	328 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	ADRB3	P13945	408 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	CTPS1	P17812	591 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	COL9A1	P20849	921 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	SSTR1	P30872	391 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms