RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ITKQ08881 620 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 FASTKQ14296 549 aaKnown RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PPP1R3AQ16821 1122 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 ALFQ53S48 1182 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 SIRPB2Q5JXA9 342 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 RASIP1Q5U651 963 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PTAR1Q7Z6K3 402 aaPredicted RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 TFAP2DQ7Z6R9 452 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 NUP93Q8N1F7 819 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PCDH20Q8N6Y1 951 aaKnown RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PNPLA1Q8N8W4 532 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 ARRDC2Q8TBH0 407 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 TOP1MTQ969P6 601 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 L3HYPDHQ96EM0 354 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 TRMOQ9BU70 441 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 UNC93B1Q9H1C4 597 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 TRPC7Q9HCX4 862 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 MRPL40Q9NQ50 206 aaKnown RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 CACNA2D2Q9NY47 1150 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 TRAF6Q9Y4K3 522 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 RNASEH2AO75792 299 aaKnown RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 CYBAP13498 195 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PMLP29590 882 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 KCNC1P48547 511 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 GPR15P49685 360 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 ATP4BP51164 291 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PLK1P53350 603 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 TRAP1Q12931 704 aaKnown RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PDAP1Q13442 181 aaKnown RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 TRIM25Q14258 630 aaKnown RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 C11orf91Q3C1V1 193 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 AGKQ53H12 422 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 ZNF678Q5SXM1 525 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 SDHAF4Q5VUM1 108 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 C8orf82Q6P1X6 216 aaPredicted RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 ISCA2Q86U28 154 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 LDB1Q86U70 411 aaPredicted RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 SPATA24Q86W54 205 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PGBD5Q8N414 524 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 FAM156AQ8NDB6 213 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 HDAC10Q969S8 669 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PSMG2Q969U7 264 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PHF21BQ96EK2 531 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 C8orf48Q96LL4 319 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 EPB41L1Q9H4G0 881 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 SP110Q9HB58 689 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 ADA2Q9NZK5 511 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 MARCH4Q9P2E8 410 aaPredicted RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 CNOT11Q9UKZ1 510 aaKnown RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 TDRD15B5MCY1 1934 aaKnown RBP8.98□□□□□ -0.97
NCBP3-204ENST00000574911 PLXNA3P51805 1871 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 BPTFQ12830 3046 aa8.98□□□□□ -0.97
NCBP3-204ENST00000574911 SMIM31A0A1B0GVY4 71 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 TTC24A2A3L6 582 aaPredicted RBP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 TNPO2O14787 897 aaKnown RBP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 LDB2O43679 373 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 B4GALT3O60512 393 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 OAZ2O95190 189 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 SNRPB2P08579 225 aaKnown RBP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 CTGFP29279 349 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 ATXN3P54252 364 aaPredicted RBP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 NFKB2Q00653 900 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 ACVR1Q04771 509 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 UNC50Q53HI1 259 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 GPR158Q5T848 1215 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 FAM45BPQ6NSW5 357 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 PAOXQ6QHF9 649 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 CYHR1Q6ZMK1 362 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 LARP4Q71RC2 724 aaKnown RBP eCLIP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 RASAL3Q86YV0 1011 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 DCP1BQ8IZD4 617 aaKnown RBP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 FAM45AQ8TCE6 357 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 SH3RF2Q8TEC5 729 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 PABPC5Q96DU9 382 aaKnown RBP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 DUS3LQ96G46 650 aaKnown RBP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 ALG9Q9H6U8 611 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 ABI2Q9NYB9 513 aaPredicted RBP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 NDUFA13Q9P0J0 144 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 GMIPQ9P107 970 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 CD300AQ9UGN4 299 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 AP4B1Q9Y6B7 739 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 MYO16Q9Y6X6 1858 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 MANSC4A6NHS7 340 aaPredicted RBP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 DRGXA6NNA5 263 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 CCL22O00626 93 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 TCN1P20061 433 aaPredicted RBP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 FDXRP22570 491 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 HSPA13P48723 471 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 USP46P62068 366 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 CDKL1Q00532 357 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 TIAL1Q01085 375 aaKnown RBP eCLIP8.97□□□□□ -0.973e-6■■□□□ 12.7
NCBP3-204ENST00000574911 IL10RBQ08334 325 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 ILF2Q12905 390 aaKnown RBP8.97□□□□□ -0.97
NCBP3-204ENST00000574911 DDR2Q16832 855 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 IL23RQ5VWK5 629 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 CST9Q5W186 159 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 HACD2Q6Y1H2 254 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 ATP6V0D2Q8N8Y2 350 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 OR6P1Q8NGX9 317 aa8.97□□□□□ -0.97
NCBP3-204ENST00000574911 NAT14Q8WUY8 206 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms