RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 GPR78Q96P69 363 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 CTRCQ99895 268 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 ING2Q9H160 280 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 MEAF6Q9HAF1 191 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 HMG20AQ9NP66 347 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 MAP10Q9P2G4 905 aa14.49□□□□□ -0.09
SMG6-215ENST00000574501 PSMD11O00231 422 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 AXIN1O15169 862 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 NPHS1O60500 1241 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 RSL1D1O76021 490 aaKnown RBP14.48□□□□□ -0.09
SMG6-215ENST00000574501 KCNA5P22460 613 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 GLUD2P49448 558 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 ATP6V0D1P61421 351 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 POLD3Q15054 466 aaPredicted RBP14.48□□□□□ -0.09
SMG6-215ENST00000574501 ATF7IP2Q5U623 682 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 IQSEC1Q6DN90 963 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 XRRA1Q6P2D8 792 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 USP51Q70EK9 711 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 ACOT1Q86TX2 421 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 MFSD6LQ8IWD5 586 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 SFRP1Q8N474 314 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 PDZD8Q8NEN9 1154 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 TRPV3Q8NET8 790 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 FUNDC2Q9BWH2 189 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 TRIM15Q9C019 465 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 SPON1Q9HCB6 807 aa14.48□□□□□ -0.09
SMG6-215ENST00000574501 YDJCA8MPS7 323 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 SPATA31C2B4DYI2 1134 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 INO80B-WBP1J3KQ70 363 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 ARPC2O15144 300 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 AP2A1O95782 977 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 LCP1P13796 627 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 TGM1P22735 817 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 ADARB1P78563 741 aaKnown RBP14.47□□□□□ -0.09
SMG6-215ENST00000574501 CLPPQ16740 277 aaPredicted RBP14.47□□□□□ -0.09
SMG6-215ENST00000574501 KIF19Q2TAC6 998 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 GADL1Q6ZQY3 521 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 SLC26A9Q7LBE3 791 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 PIWIL4Q7Z3Z4 852 aaKnown RBP14.47□□□□□ -0.09
SMG6-215ENST00000574501 CUZD1Q86UP6 607 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 ITIH5Q86UX2 942 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 ANKRD13BQ86YJ7 626 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 HEXDCQ8WVB3 486 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 PHF21BQ96EK2 531 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 NT5C1AQ9BXI3 368 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 NIFKQ9BYG3 293 aaKnown RBP14.47□□□□□ -0.09
SMG6-215ENST00000574501 SNX25Q9H3E2 840 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 RHOJQ9H4E5 214 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 LRRC4Q9HBW1 653 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 CMTM6Q9NX76 183 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 GIMAP2Q9UG22 337 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 PSME4Q14997 1843 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.47□□□□□ -0.09
SMG6-215ENST00000574501 GFAPP14136 432 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 IL7RP16871 459 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 CLCQ05315 142 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 INAQ16352 499 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 ARMCX6Q7L4S7 300 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 R3HCC1LQ7Z5L2 792 aaKnown RBP14.47□□□□□ -0.09
SMG6-215ENST00000574501 DEFB132Q7Z7B7 95 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 ZBTB8OSQ8IWT0 167 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 PNPT1Q8TCS8 783 aaKnown RBP14.47□□□□□ -0.09
SMG6-215ENST00000574501 SEPHS2Q99611 448 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 IL12RB2Q99665 862 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 NACA2Q9H009 215 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 MRPL46Q9H2W6 279 aaKnown RBP14.47□□□□□ -0.09
SMG6-215ENST00000574501 ATP13A3Q9H7F0 1226 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 LTB4R2Q9NPC1 389 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 ANKMY1Q9P2S6 941 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 MTRRQ9UBK8 725 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 KLHL3Q9UH77 587 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 ATP11BQ9Y2G3 1177 aa14.47□□□□□ -0.09
SMG6-215ENST00000574501 A0A0J9YYE9 177 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 H0Y858 1186 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 ZBTB24O43167 697 aaPredicted RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 MSI1O43347 362 aaKnown RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 ALBP02768 609 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 ALDOCP09972 364 aaKnown RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 JUNBP17275 347 aaPredicted RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 RFC2P35250 354 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 RAB10P61026 200 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 MAPRE1Q15691 268 aaKnown RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 UTS2BQ765I0 119 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 VASH1Q7L8A9 365 aaPredicted RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 SLCO6A1Q86UG4 719 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 SMG8Q8ND04 991 aaKnown RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 CAPSLQ8WWF8 208 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 C3orf30Q96M34 536 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 PCYT2Q99447 389 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 RPAP3Q9H6T3 665 aaPredicted RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 AKIP1Q9NQ31 210 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 CASS4Q9NQ75 786 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 TLR9Q9NR96 1032 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 CHST12Q9NRB3 414 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 VWA7Q9Y334 891 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 ZFC3H1O60293 1989 aaKnown RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 ZNF638Q14966 1978 aaKnown RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 COL2A1P02458 1487 aaPredicted RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 VWA5AO00534 786 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 AURKAO14965 403 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms