RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 SKA1Q96BD8 255 aa11.97□□□□□ -0.49
NDE1-206ENST00000572967 ELF4Q99607 663 aaPredicted RBP11.97□□□□□ -0.49
NDE1-206ENST00000572967 CDC6Q99741 560 aa11.97□□□□□ -0.49
NDE1-206ENST00000572967 HERPUD2Q9BSE4 406 aa11.97□□□□□ -0.49
NDE1-206ENST00000572967 CINPQ9BW66 212 aaPredicted RBP11.97□□□□□ -0.49
NDE1-206ENST00000572967 TM6SF2Q9BZW4 377 aa11.97□□□□□ -0.49
NDE1-206ENST00000572967 CEP44Q9C0F1 390 aa11.97□□□□□ -0.49
NDE1-206ENST00000572967 DYRK4Q9NR20 520 aa11.97□□□□□ -0.49
NDE1-206ENST00000572967 GDF3Q9NR23 364 aa11.97□□□□□ -0.49
NDE1-206ENST00000572967 NDFIP2Q9NV92 336 aa11.97□□□□□ -0.49
NDE1-206ENST00000572967 GOLGA6AQ9NYA3 693 aa11.97□□□□□ -0.49
NDE1-206ENST00000572967 IL36AQ9UHA7 158 aa11.97□□□□□ -0.49
NDE1-206ENST00000572967 R3HDM2Q9Y2K5 976 aaKnown RBP11.97□□□□□ -0.49
NDE1-206ENST00000572967 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
NDE1-206ENST00000572967 ANKRD36A6QL64 1941 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 TCRBV7S2A1N4TA0A589 114 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 KCNN4O15554 427 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 PCDHGA12O60330 932 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 MAFKO60675 156 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 RNGTTO60942 597 aaKnown RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 SDC3O75056 442 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 LEFTY1O75610 366 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 PRNPP04156 253 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 CES1P23141 567 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 ACVRL1P37023 503 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 TNNT3P45378 269 aaPredicted RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 RECQLP46063 649 aaPredicted RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 NXPH1P58417 271 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 DR1Q01658 176 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 PPP1R7Q15435 360 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 SHBQ15464 509 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 SIX1Q15475 284 aaPredicted RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 OASLQ15646 514 aaKnown RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 P3H1Q32P28 736 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 GLE1Q53GS7 698 aaKnown RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 SETMARQ53H47 684 aaPredicted RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 C8orf74Q6P047 294 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 LEKR1Q6ZMV7 388 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 DPY19L3Q6ZPD9 716 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 ARHGEF18Q6ZSZ5 1173 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 PRPF39Q86UA1 669 aaKnown RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 MARCH9Q86YJ5 346 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 KDF1Q8NAX2 398 aaPredicted RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 OR6K2Q8NGY2 324 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 SLCO2A1Q92959 643 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 LGMNQ99538 433 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 NOL6Q9H6R4 1146 aaKnown RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 ZDHHC6Q9H6R6 413 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 PREBQ9HCU5 417 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 SMARCAL1Q9NZC9 954 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 SEPT10Q9P0V9 454 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 KLHL8Q9P2G9 620 aaPredicted RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 SAE1Q9UBE0 346 aaPredicted RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 PCYOX1Q9UHG3 505 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 RALYQ9UKM9 306 aaKnown RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 DNPEPQ9ULA0 475 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 TPX2Q9ULW0 747 aaKnown RBP11.96□□□□□ -0.49
NDE1-206ENST00000572967 MFHAS1Q9Y4C4 1052 aa11.96□□□□□ -0.49
NDE1-206ENST00000572967 USP24Q9UPU5 2620 aa11.96□□□□□ -0.5
NDE1-206ENST00000572967 TDRD6O60522 2096 aaKnown RBP11.95□□□□□ -0.5
NDE1-206ENST00000572967 TRPM6Q9BX84 2022 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 FAM187AA6NFU0 413 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 TNFSF14O43557 240 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 ZMPSTE24O75844 475 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 MAP3K6O95382 1288 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 SLU7O95391 586 aaKnown RBP11.95□□□□□ -0.5
NDE1-206ENST00000572967 IFNB1P01574 187 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 CCNB1P14635 433 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 CA4P22748 312 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 MMP13P45452 471 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 CCNHP51946 323 aaPredicted RBP11.95□□□□□ -0.5
NDE1-206ENST00000572967 CLDN6P56747 220 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 SLC10A2Q12908 348 aaPredicted RBP11.95□□□□□ -0.5
NDE1-206ENST00000572967 SNX1Q13596 522 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 PRPSAP1Q14558 356 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 LBRQ14739 615 aaKnown RBP11.95□□□□□ -0.5
NDE1-206ENST00000572967 ARSIQ5FYB1 569 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 RALGPS1Q5JS13 557 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 DBX2Q6ZNG2 339 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 SPATS2Q86XZ4 545 aaKnown RBP11.95□□□□□ -0.5
NDE1-206ENST00000572967 KLHL7Q8IXQ5 586 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 MAML1Q92585 1016 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 RTP4Q96DX8 246 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 PPP1R16AQ96I34 528 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 SPATA13Q96N96 652 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 KRT12Q99456 494 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 CARD6Q9BX69 1037 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 DDX47Q9H0S4 455 aaKnown RBP11.95□□□□□ -0.5
NDE1-206ENST00000572967 RAB17Q9H0T7 212 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 KDM4CQ9H3R0 1056 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 PCDH9Q9HC56 1237 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 PAK5Q9P286 719 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 WASF2Q9Y6W5 498 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 CHD8Q9HCK8 2581 aa11.95□□□□□ -0.5
NDE1-206ENST00000572967 LRRK1Q38SD2 2015 aa11.94□□□□□ -0.5
NDE1-206ENST00000572967 MYLKQ15746 1914 aa11.94□□□□□ -0.5
NDE1-206ENST00000572967 A0A1W2PQU0 124 aa11.94□□□□□ -0.5
NDE1-206ENST00000572967 FAM149AA5PLN7 773 aa11.94□□□□□ -0.5
NDE1-206ENST00000572967 C5orf60A6NFR6 353 aa11.94□□□□□ -0.5
NDE1-206ENST00000572967 TLR4O00206 839 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms