RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 KHNYNO15037 678 aaKnown RBP7.02□□□□□ -1.29
SMG6-209ENST00000571442 TSPAN6O43657 245 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 SOCS5O75159 536 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 TJP3O95049 919 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 CPP00450 1065 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 SERPINF2P08697 491 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 C1SP09871 688 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 C6P13671 934 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 ETS1P14921 441 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 HNF1BP35680 557 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 CHRNA4P43681 627 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 MAPK8P45983 427 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 LIG3P49916 1009 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 RACK1P63244 317 aaKnown RBP7.02□□□□□ -1.29
SMG6-209ENST00000571442 FAM193AP78312 1265 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 SFSWAPQ12872 951 aaKnown RBP7.02□□□□□ -1.29
SMG6-209ENST00000571442 XRCC4Q13426 336 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 GALNT3Q14435 633 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 GRM3Q14832 879 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 SHBQ15464 509 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 OASLQ15646 514 aaKnown RBP7.02□□□□□ -1.29
SMG6-209ENST00000571442 PCSK7Q16549 785 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 CDKN3Q16667 212 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 QPCTQ16769 361 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 ZNF569Q5MCW4 686 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 SYCP2LQ5T4T6 812 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 ARMC12Q5T9G4 340 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 NAPEPLDQ6IQ20 393 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 NEK5Q6P3R8 708 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 BRAT1Q6PJG6 821 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 LIPIQ6XZB0 460 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 DPPA4Q7L190 304 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 KDELC2Q7Z4H8 507 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 HSD11B1LQ7Z5J1 315 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 CBARPQ8N350 705 aaPredicted RBP7.02□□□□□ -1.29
SMG6-209ENST00000571442 BBS5Q8N3I7 341 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 TP53I13Q8NBR0 393 aaPredicted RBP7.02□□□□□ -1.29
SMG6-209ENST00000571442 PLA2G15Q8NCC3 412 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 TRIM58Q8NG06 486 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 OR13H1Q8NG92 308 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 CCDC110Q8TBZ0 833 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 HCAR2Q8TDS4 363 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 COG1Q8WTW3 980 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 SPOCK2Q92563 424 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 RAB7BQ96AH8 199 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 CENPTQ96BT3 561 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 EID2BQ96D98 161 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 SERAC1Q96JX3 654 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 MRGPRX2Q96LB1 330 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 ALS2CR12Q96Q35 445 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 MCCC1Q96RQ3 725 aaPredicted RBP7.02□□□□□ -1.29
SMG6-209ENST00000571442 WDR24Q96S15 920 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 EDEM2Q9BV94 578 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 SLC17A9Q9BYT1 436 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 CARD9Q9H257 536 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 AMACRQ9UHK6 382 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 FNDC3AQ9Y2H6 1198 aaKnown RBP7.02□□□□□ -1.29
SMG6-209ENST00000571442 PPIL1Q9Y3C6 166 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 CABIN1Q9Y6J0 2220 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 A0A0J9YYE9 177 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 C4orf47A7E2U8 309 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 K7ESM1 405 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 NEMP1O14524 444 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 ARHGAP33O14559 1287 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 TM4SF5O14894 197 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 AURKAO14965 403 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 VILLO15195 856 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 ZNF185O15231 689 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 KCNN4O15554 427 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 LIASO43766 372 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 CEP104O60308 925 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 PMPCBO75439 489 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 TM7SF2O76062 418 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 RECQL5O94762 991 aaPredicted RBP7.01□□□□□ -1.29
SMG6-209ENST00000571442 HEXIM1O94992 359 aaKnown RBP7.01□□□□□ -1.29
SMG6-209ENST00000571442 METTL18O95568 372 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 TRBC1P01850 177 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 ATXN1LP0C7T5 689 aaKnown RBP7.01□□□□□ -1.29
SMG6-209ENST00000571442 PIRTP0C851 137 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 KCNA4P22459 653 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 HNRNPA2B1P22626 353 aaKnown RBP7.01□□□□□ -1.29
SMG6-209ENST00000571442 PSMB4P28070 264 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 CD38P28907 300 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 VIPR1P32241 457 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 HOXD12P35452 270 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 CTSKP43235 329 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 GRIA4P48058 902 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 RPS21P63220 83 aaKnown RBP7.01□□□□□ -1.29
SMG6-209ENST00000571442 IL9RQ01113 521 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 SNX1Q13596 522 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 SPARCL1Q14515 664 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 IRF4Q15306 451 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 WSCD2Q2TBF2 565 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 HLA-BQ31612 363 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 AASDHQ4L235 1098 aaPredicted RBP7.01□□□□□ -1.29
SMG6-209ENST00000571442 SETMARQ53H47 684 aaPredicted RBP7.01□□□□□ -1.29
SMG6-209ENST00000571442 RALGPS1Q5JS13 557 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 ANKRD20A2Q5SQ80 823 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 SEL1L2Q5TEA6 688 aa7.01□□□□□ -1.29
SMG6-209ENST00000571442 FAXCQ5TGI0 409 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms