RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 FZD6O60353 706 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 PGLSO95336 258 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 LDOC1O95751 146 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-220ENST00000569916 CSF2P04141 144 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 HLA-DQB2P05538 268 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 CCNB1P14635 433 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 CDC25BP30305 580 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 CDKN2BP42772 138 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 MARCKSL1P49006 195 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 THOP1P52888 689 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 HNRNPKP61978 463 aaKnown RBP eCLIP13.09□□□□□ -0.31
CNOT1-220ENST00000569916 DSC2Q02487 901 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 EIF2B5Q13144 721 aaKnown RBP13.09□□□□□ -0.31
CNOT1-220ENST00000569916 DNAJC3Q13217 504 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 TAZQ16635 292 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 NPNTQ6UXI9 565 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 MACC1Q6ZN28 852 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 RFX6Q8HWS3 928 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 CCDC13Q8IYE1 715 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 CCNYQ8ND76 341 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 TPCN2Q8NHX9 752 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 ARRDC2Q8TBH0 407 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 ZNF830Q96NB3 372 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-220ENST00000569916 OLFM3Q96PB7 478 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 LGMNQ99538 433 aa13.09□□□□□ -0.31
CNOT1-220ENST00000569916 TMEM121BQ9BXQ6 578 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-220ENST00000569916 PNMA8BQ9ULN7 279 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-220ENST00000569916 AKAP13Q12802 2813 aa13.08□□□□□ -0.31
CNOT1-220ENST00000569916 FAM221BA6H8Z2 402 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 NPIPB15A6NHN6 443 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-220ENST00000569916 A8MX80 341 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 KCNK1O00180 336 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 RECQL5O94762 991 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-220ENST00000569916 PDHA1P08559 390 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 ZFXP17010 805 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-220ENST00000569916 LHCGRP22888 699 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 VIPR1P32241 457 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 ACADVLP49748 655 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 DYNLT1P63172 113 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 IFI35P80217 286 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-220ENST00000569916 ITKQ08881 620 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 NIPAL4Q0D2K0 466 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 ZBTB17Q13105 803 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 PTK2BQ14289 1009 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 CNGA3Q16281 694 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 PROX2Q3B8N5 592 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 ODF2Q5BJF6 829 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 ARMC12Q5T9G4 340 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 ACRBPQ8NEB7 543 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 ZNF548Q8NEK5 533 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-220ENST00000569916 OR4C6Q8NH72 309 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 PIH1D2Q8WWB5 315 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 MCCC1Q96RQ3 725 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-220ENST00000569916 IL12RB2Q99665 862 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 BAG1Q99933 345 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-220ENST00000569916 TDRD1Q9BXT4 1180 aaKnown RBP13.08□□□□□ -0.32
CNOT1-220ENST00000569916 MAK16Q9BXY0 300 aaKnown RBP13.08□□□□□ -0.32
CNOT1-220ENST00000569916 IMPACTQ9P2X3 320 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 PHTF1Q9UMS5 762 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 MSRB2Q9Y3D2 182 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 TTLL3Q9Y4R7 772 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 RAI2Q9Y5P3 530 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 CHD8Q9HCK8 2581 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 CEP295Q9C0D2 2601 aa13.08□□□□□ -0.32
CNOT1-220ENST00000569916 BTNL10A8MVZ5 291 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 H3BM21 787 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 FFAR2O15552 330 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 SIGLEC6O43699 453 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 NEBLO76041 1014 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 HEXIM1O94992 359 aaKnown RBP13.07□□□□□ -0.32
CNOT1-220ENST00000569916 IPO7O95373 1038 aaKnown RBP13.07□□□□□ -0.32
CNOT1-220ENST00000569916 PCCBP05166 539 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 KRT10P13645 584 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 CES1P23141 567 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 VAV2P52735 878 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 ZNF211Q13398 564 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-220ENST00000569916 MTM1Q13496 603 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 INPP5AQ14642 412 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 PTPRRQ15256 657 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 SPOCD1Q6ZMY3 1216 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 DAAM2Q86T65 1068 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 KATNAL2Q8IYT4 538 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 RBFAQ8N0V3 343 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.07□□□□□ -0.32
CNOT1-220ENST00000569916 CNTD1Q8N815 330 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 SPC24Q8NBT2 197 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 PLA2G15Q8NCC3 412 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 KRT35Q92764 455 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 GATA6Q92908 595 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 SCRN2Q96FV2 425 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 COQ10AQ96MF6 247 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 APOOQ9BUR5 198 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 LACRTQ9GZZ8 138 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 TCEAL2Q9H3H9 227 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-220ENST00000569916 HAUS2Q9NVX0 235 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 NLGN3Q9NZ94 848 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 APOBEC3BQ9UH17 382 aaKnown RBP13.07□□□□□ -0.32
CNOT1-220ENST00000569916 PPIL1Q9Y3C6 166 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 PCDHGA1Q9Y5H4 931 aa13.07□□□□□ -0.32
CNOT1-220ENST00000569916 DUSP10Q9Y6W6 482 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms