RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 GRK6P43250 576 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 RABIFP47224 123 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 COPS2P61201 443 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 FAM193AP78312 1265 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 IL9RQ01113 521 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 SEMG2Q02383 582 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 DSC2Q02487 901 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 ITKQ08881 620 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 NIPAL4Q0D2K0 466 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 AP1B1Q10567 949 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 PRKD1Q15139 912 aaPredicted RBP11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 LLGL1Q15334 1064 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 WSCD2Q2TBF2 565 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 ARMC12Q5T9G4 340 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 KAZNQ674X7 775 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 LIPIQ6XZB0 460 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 BBS12Q6ZW61 710 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 KANSL1Q7Z3B3 1105 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 GLRX5Q86SX6 157 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 RNF10Q8N5U6 811 aaKnown RBP11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 CCDC112Q8NEF3 446 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 SETD7Q8WTS6 366 aaKnown RBP11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 PIH1D2Q8WWB5 315 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 ALG3Q92685 438 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 IFT43Q96FT9 208 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 SCRN2Q96FV2 425 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 MCCC1Q96RQ3 725 aaPredicted RBP11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 C1QTNF7Q9BXJ2 289 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 MBNL1Q9NR56 388 aaKnown RBP11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 B4GALT6Q9UBX8 382 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 BTBD3Q9Y2F9 522 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 EFR3BQ9Y2G0 817 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 COQ6Q9Y2Z9 468 aa11.13□□□□□ -0.63
SHCBP1-207ENST00000569702 ARID1BQ8NFD5 2236 aaPredicted RBP11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 TOR1BO14657 336 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 PRLP01236 227 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 KCNA4P22459 653 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 PTPN7P35236 360 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 IGFALSP35858 605 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 RWDD2BP57060 319 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 YPEL5P62699 121 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 BNIP3Q12983 259 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 FZD2Q14332 565 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 LRRC14Q15048 493 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 TRIP6Q15654 476 aaKnown RBP11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 TPRG1LQ5T0D9 272 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 KDM7AQ6ZMT4 941 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 PTAR1Q7Z6K3 402 aaPredicted RBP11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 GATAD2AQ86YP4 633 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 CCDC50Q8IVM0 306 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 LRRC8AQ8IWT6 810 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 SYCE1Q8N0S2 351 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 PAF1Q8N7H5 531 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 PDCD6IPQ8WUM4 868 aaKnown RBP11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 P3H4Q92791 437 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 HERPUD2Q9BSE4 406 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 TDRD1Q9BXT4 1180 aaKnown RBP11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 GRPEL1Q9HAV7 217 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 AMFRQ9UKV5 643 aa11.12□□□□□ -0.63
SHCBP1-207ENST00000569702 A0A0J9YYE9 177 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 SPAARA0A1B0GVQ0 90 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 NPIPB15A6NHN6 443 aaPredicted RBP11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 APOC4-APOC2K7ER74 178 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 LZTS3O60299 673 aaPredicted RBP11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 NEBLO76041 1014 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 RECQL5O94762 991 aaPredicted RBP11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 HEXIM1O94992 359 aaKnown RBP11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 TRBC1P01850 177 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 APOC2P02655 101 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 CSF2P04141 144 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 ITGAVP06756 1048 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 ELFN1P0C7U0 828 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 PYGMP11217 842 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 LHCGRP22888 699 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 NFKBIAP25963 317 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 PMLP29590 882 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 VIPR1P32241 457 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 RPL26P61254 145 aaKnown RBP11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 SIM1P81133 766 aaPredicted RBP11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 SKOR1P84550 965 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 WASHC5Q12768 1159 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 PDE1CQ14123 709 aaPredicted RBP11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 IRF4Q15306 451 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 CNGA3Q16281 694 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 TEX44Q53QW1 395 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 ZNF662Q6ZS27 426 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 B4GALNT4Q76KP1 1039 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 PEX26Q7Z412 305 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 SLC25A45Q8N413 288 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 RHBDD1Q8TEB9 315 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 TFB1MQ8WVM0 346 aaKnown RBP11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 TADA1Q96BN2 335 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 IMP4Q96G21 291 aaKnown RBP11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 TEKT5Q96M29 485 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 COQ10AQ96MF6 247 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 AGAP3Q96P47 875 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 CDC6Q99741 560 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 HEMGNQ9BXL5 484 aa11.11□□□□□ -0.63
SHCBP1-207ENST00000569702 CEP41Q9BYV8 373 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms