RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 UBP1Q9NZI7 540 aa12.88□□□□□ -0.35
CDT1-203ENST00000569140 TCRBV7S2A1N4TA0A589 114 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 GOLGA6CA6NDK9 693 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 GOLGA6BA6NDN3 693 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 A6NNZ2 444 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 TLR4O00206 839 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 ENC1O14682 589 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 RAD51BO15315 384 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 KIF5CO60282 957 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 MAGEC1O60732 1142 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 PMPCBO75439 489 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 PCCBP05166 539 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 PDHA1P08559 390 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 GOLGA6DP0CG33 693 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 SDHBP21912 280 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 MSNP26038 577 aaKnown RBP12.87□□□□□ -0.35
CDT1-203ENST00000569140 VIPR1P32241 457 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 SKOR1P84550 965 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 GALNT3Q14435 633 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 HLA-BQ31612 363 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 ZNF569Q5MCW4 686 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 ALG1LQ6GMV1 187 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 ZNF567Q8N184 647 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 MFSD2AQ8NA29 543 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 SPATA22Q8NHS9 363 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 SLC25A51Q9H1U9 297 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 IL21RQ9HBE5 538 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 GOLGA6AQ9NYA3 693 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 R3HDM2Q9Y2K5 976 aaKnown RBP12.87□□□□□ -0.35
CDT1-203ENST00000569140 GPR179Q6PRD1 2367 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 PCDH15Q96QU1 1955 aa12.87□□□□□ -0.35
CDT1-203ENST00000569140 A0A1W2PR77 199 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 NPIPB15A6NHN6 443 aaPredicted RBP12.86□□□□□ -0.35
CDT1-203ENST00000569140 CDX4O14627 284 aaPredicted RBP12.86□□□□□ -0.35
CDT1-203ENST00000569140 CEP104O60308 925 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 MT-CYBP00156 380 aaPredicted RBP12.86□□□□□ -0.35
CDT1-203ENST00000569140 MMP2P08253 660 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 CXCR5P32302 372 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 ID4P47928 161 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 BNC1Q01954 994 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 WASHC5Q12768 1159 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 RALGDSQ12967 914 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 LRRC14Q15048 493 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 PTPRRQ15256 657 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 IRF4Q15306 451 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 PRAMEF14Q5SWL7 426 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 ITPRIPL1Q6GPH6 555 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 CCDC70Q6NSX1 233 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 GCNT7Q6ZNI0 430 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 Q6ZSR6 202 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 SLC13A5Q86YT5 568 aaPredicted RBP12.86□□□□□ -0.35
CDT1-203ENST00000569140 OR13H1Q8NG92 308 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 ATG4AQ8WYN0 398 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 IMP4Q96G21 291 aaKnown RBP12.86□□□□□ -0.35
CDT1-203ENST00000569140 TEKT5Q96M29 485 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 SMIM14Q96QK8 99 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 VAT1Q99536 393 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 C1QTNF2Q9BXJ5 285 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 ADGRE3Q9BY15 652 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 TRHDEQ9UKU6 1024 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 PYCARDQ9ULZ3 195 aa12.86□□□□□ -0.35
CDT1-203ENST00000569140 FNDC3AQ9Y2H6 1198 aaKnown RBP12.86□□□□□ -0.35
CDT1-203ENST00000569140 OTOGLQ3ZCN5 2332 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 FRYLO94915 3013 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 A0A0U1RQS6 177 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 POM121BA6NF01 834 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 CAPN8A6NHC0 703 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 C10orf142B7Z368 130 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 SLC30A4O14863 429 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 RECQL5O94762 991 aaPredicted RBP12.85□□□□□ -0.35
CDT1-203ENST00000569140 HNF1BP35680 557 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 IGFALSP35858 605 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 CTSKP43235 329 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 CCT8P50990 548 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 THOP1P52888 689 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 LIMK1P53667 647 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 NXPH1P58417 271 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 KLF1Q13351 362 aaPredicted RBP12.85□□□□□ -0.35
CDT1-203ENST00000569140 SNX1Q13596 522 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 IHHQ14623 411 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 CNGA3Q16281 694 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 LIPIQ6XZB0 460 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 KYAT3Q6YP21 454 aaKnown RBP12.85□□□□□ -0.35
CDT1-203ENST00000569140 KDM7AQ6ZMT4 941 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 ARHGEF18Q6ZSZ5 1173 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 TSPAN33Q86UF1 283 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 IQCHQ86VS3 1027 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 REXO1L1PQ8IX06 675 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 SLC35F6Q8N357 371 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 TAB3Q8N5C8 712 aaPredicted RBP12.85□□□□□ -0.35
CDT1-203ENST00000569140 TMEM145Q8NBT3 493 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 DENND6BQ8NEG7 585 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 IPMKQ8NFU5 416 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 CCDC110Q8TBZ0 833 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 UBE2Q2Q8WVN8 375 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 PIH1D2Q8WWB5 315 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 NUS1Q96E22 293 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 RTKNQ9BST9 563 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 FSD1LQ9BXM9 530 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 TLR10Q9BXR5 811 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms