RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 NR1D2Q14995 579 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 UGP2Q16851 508 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 EXOC3L4Q17RC7 722 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 LEKR1Q6ZMV7 388 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 C17orf82Q86X59 251 aaPredicted RBP12.55□□□□□ -0.4
SNX29-207ENST00000568949 SFTPA2Q8IWL1 248 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 CACNA2D3Q8IZS8 1091 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 CCDC112Q8NEF3 446 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 C9orf43Q8TAL5 461 aaPredicted RBP12.55□□□□□ -0.4
SNX29-207ENST00000568949 KIAA1524Q8TCG1 905 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 CFAP57Q96MR6 1250 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 DDA1Q9BW61 102 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 RDH14Q9HBH5 336 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 FGF22Q9HCT0 170 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 PCDH12Q9NPG4 1184 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 IGHV5-10-1A0A0J9YXX1 117 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 BLACEA4D250 179 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 GOLGA6L4A6NEF3 574 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 TMEM202A6NGA9 273 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 LRIG2O94898 1065 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 PON1P27169 355 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 LIG3P49916 1009 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 STX17P56962 302 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 OR1D5P58170 312 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 APBA1Q02410 837 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 PAK1Q13153 545 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 GRM3Q14832 879 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 TSR1Q2NL82 804 aaKnown RBP12.54□□□□□ -0.4
SNX29-207ENST00000568949 AMZ1Q400G9 498 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 ERAP2Q6P179 960 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 FAM71AQ8IYT1 594 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 AGBL5Q8NDL9 886 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 FUBP1Q96AE4 644 aaKnown RBP12.54□□□□□ -0.4
SNX29-207ENST00000568949 TBC1D31Q96DN5 1066 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 SLC45A3Q96JT2 553 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 NUDT22Q9BRQ3 303 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 ASPSCR1Q9BZE9 553 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 TMEM168Q9H0V1 697 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 PDCL3Q9H2J4 239 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 ZNF71Q9NQZ8 489 aaPredicted RBP12.54□□□□□ -0.4
SNX29-207ENST00000568949 NEU3Q9UQ49 428 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 DAAM1Q9Y4D1 1078 aa12.54□□□□□ -0.4
SNX29-207ENST00000568949 RP1L1Q8IWN7 2480 aaPredicted RBP12.54□□□□□ -0.4
SNX29-207ENST00000568949 RHPN2P1A8MT19 583 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 GOLGA8SH3BPF8 625 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 INSIG1O15503 277 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 RAD1O60671 282 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 PIGNO95427 931 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 ALDH4A1P30038 563 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 TRIM23P36406 574 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 MMP12P39900 470 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 STAT1P42224 750 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 GPR3P46089 330 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 CD97P48960 835 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 LIMK2P53671 638 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 SQSTM1Q13501 440 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 BRAT1Q6PJG6 821 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 PLA2G15Q8NCC3 412 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 MSANTD4Q8NCY6 345 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 RCBTB1Q8NDN9 531 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 OR4D9Q8NGE8 314 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 CCL4L1Q8NHW4 92 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 PMEPA1Q969W9 287 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 MIB2Q96AX9 1013 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 CCDC74BQ96LY2 380 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 ZNF641Q96N77 438 aaPredicted RBP12.53□□□□□ -0.4
SNX29-207ENST00000568949 DPYSL5Q9BPU6 564 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 EFHD1Q9BUP0 239 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 SUV39H2Q9H5I1 410 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 LRRC4CQ9HCJ2 640 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 SIX2Q9NPC8 291 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 MRPL40Q9NQ50 206 aaKnown RBP12.53□□□□□ -0.4
SNX29-207ENST00000568949 DNAJC12Q9UKB3 198 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 AJAP1Q9UKB5 411 aaPredicted RBP12.53□□□□□ -0.4
SNX29-207ENST00000568949 PLAAQ9Y263 795 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 ATP8A1Q9Y2Q0 1164 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 B3GALT1Q9Y5Z6 326 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 RELNP78509 3460 aa12.53□□□□□ -0.4
SNX29-207ENST00000568949 UNC79Q9P2D8 2635 aa12.52□□□□□ -0.4
SNX29-207ENST00000568949 B4E171 279 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 FAM72CH0Y354 149 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 PDE2AO00408 941 aaPredicted RBP12.52□□□□□ -0.41
SNX29-207ENST00000568949 PLEKP08567 350 aaPredicted RBP12.52□□□□□ -0.41
SNX29-207ENST00000568949 CCNB1P14635 433 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 CD1CP29017 333 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 TSPAN7P41732 249 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 MAZP56270 477 aaKnown RBP12.52□□□□□ -0.41
SNX29-207ENST00000568949 YBEYP58557 167 aaPredicted RBP12.52□□□□□ -0.41
SNX29-207ENST00000568949 RAB15P59190 212 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 ATP11AP98196 1134 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 FAM72AQ5TYM5 149 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 FAM72DQ6L9T8 149 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 ATCAYQ86WG3 371 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 FAM72BQ86X60 149 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 ZNF354CQ86Y25 554 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 DNAAF5Q86Y56 855 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 ZDHHC1Q8WTX9 485 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 APOBEC4Q8WW27 367 aaKnown RBP12.52□□□□□ -0.41
SNX29-207ENST00000568949 ART4Q93070 314 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms