RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	C2CD4B	A6NLJ0	364 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	TNFRSF10C	O14798	259 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	B4GAT1	O43505	415 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	PIGN	O95427	931 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	NTRK1	P04629	796 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	PCCB	P05166	539 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	MME	P08473	750 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	CCL4	P13236	92 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	SDC4	P31431	198 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	MMP12	P39900	470 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	PTPN9	P43378	593 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	LIG3	P49916	1009 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	HDAC4	P56524	1084 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	KIAA1024L	P59773	190 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	RAPGEF1	Q13905	1077 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	GRM3	Q14832	879 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	CYTH1	Q15438	398 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	MAN2A1	Q16706	1144 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	TMEM164	Q5U3C3	297 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	NAA35	Q5VZE5	725 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	SPECC1L	Q69YQ0	1117 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	BRAT1	Q6PJG6	821 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	CCDC185	Q8N715	623 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	PLA2G15	Q8NCC3	412 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	OR56A4	Q8NGH8	313 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	GPT2	Q8TD30	523 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	NKD1	Q969G9	470 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	NTAN1	Q96AB6	310 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	FUBP1	Q96AE4	644 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	ZNF641	Q96N77	438 aa	Predicted RBP	11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	TMEM168	Q9H0V1	697 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	MRPL40	Q9NQ50	206 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	SEPT3	Q9UH03	358 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	ATP8A1	Q9Y2Q0	1164 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	FHOD1	Q9Y613	1164 aa		11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	USP9Y	O00507	2555 aa	Predicted RBP	11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.45	□□□□□ -0.58
TCF4-238	ENST00000568169	CLEC18A	A5D8T8	446 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169		B4DGG1	531 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	RASA4B	C9J798	803 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	STMND1	H3BQB6	276 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	CACNB4	O00305	520 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	RASA4	O43374	803 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	CPNE6	O95741	557 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	HOXC4	P09017	264 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	MMP8	P22894	467 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	KEL	P23276	732 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	TRIM23	P36406	574 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	ARSD	P51689	593 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	RALGDS	Q12967	914 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	SERINC3	Q13530	473 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	UBAP2L	Q14157	1087 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	CLPP	Q16740	277 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	MAP9	Q49MG5	647 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	EFHC2	Q5JST6	749 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	MIIP	Q5JXC2	388 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	KLHDC7A	Q5VTJ3	777 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	ERAP2	Q6P179	960 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	CLEC18B	Q6UXF7	455 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	ZNF438	Q7Z4V0	828 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	PIM3	Q86V86	326 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	C17orf82	Q86X59	251 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	ZSWIM9	Q86XI8	627 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	ZNF354C	Q86Y25	554 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	DNAAF5	Q86Y56	855 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	CLEC18C	Q8NCF0	446 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	CCL4L1	Q8NHW4	92 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	JOSD2	Q8TAC2	188 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	EPS8L1	Q8TE68	723 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	EXOC2	Q96KP1	924 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	NCAPG	Q9BPX3	1015 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	NAA15	Q9BXJ9	866 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	NDST4	Q9H3R1	872 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	DPEP2	Q9H4A9	486 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	RDH14	Q9HBH5	336 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	TUBD1	Q9UJT1	453 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	PCDHGA3	Q9Y5H0	932 aa		11.44	□□□□□ -0.58
TCF4-238	ENST00000568169	WASH4P	A8MWX3	477 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	HGS	O14964	777 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	BUB1B	O60566	1050 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	RECQL5	O94762	991 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	CYP1A1	P04798	512 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	FGF3	P11487	239 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	EPHB2	P29323	1055 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	ATP1A2	P50993	1020 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	NR1D2	Q14995	579 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	PARP15	Q460N3	678 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	VWA3B	Q502W6	1294 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	BORA	Q6PGQ7	559 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	PHLDB2	Q86SQ0	1253 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	PTRH1	Q86Y79	214 aa	Known RBP	11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	CAMK1D	Q8IU85	385 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	UMODL1-AS1	Q8N2C9	162 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	PYROXD2	Q8N2H3	581 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	KIAA1524	Q8TCG1	905 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	JPH3	Q8WXH2	748 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	TAAR9	Q96RI9	348 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	TUBGCP5	Q96RT8	1024 aa		11.43	□□□□□ -0.58

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