RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CAMK1DQ8IU85 385 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 PCDH19Q8TAB3 1148 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 ATXN7L3BQ96GX2 97 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 LIN37Q96GY3 246 aaPredicted RBP18.72■□□□□ 0.59
LINC01238-205ENST00000567549 CRELD1Q96HD1 420 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 CELF6Q96J87 481 aaKnown RBP18.72■□□□□ 0.59
LINC01238-205ENST00000567549 SLC46A1Q96NT5 459 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 GFM1Q96RP9 751 aaKnown RBP18.72■□□□□ 0.59
LINC01238-205ENST00000567549 SLC39A8Q9C0K1 460 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 AIPL1Q9NZN9 384 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 CNOT8Q9UFF9 292 aaKnown RBP18.72■□□□□ 0.59
LINC01238-205ENST00000567549 PCSK1NQ9UHG2 260 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 ENTPD2Q9Y5L3 495 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 BZW2Q9Y6E2 419 aaKnown RBP18.72■□□□□ 0.59
LINC01238-205ENST00000567549 DGKBQ9Y6T7 804 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 CELSR3Q9NYQ7 3312 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 LRRC53A6NM62 1247 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 TNFRSF10CO14798 259 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 INSIG1O15503 277 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 KLK10O43240 276 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 FTLP02792 175 aaPredicted RBP18.71■□□□□ 0.59
LINC01238-205ENST00000567549 PCCBP05166 539 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 ITGA2BP08514 1039 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 PCK1P35558 622 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 PRKCIP41743 596 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 GSE1Q14687 1217 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 BOLA3Q53S33 107 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 TAF1BQ53T94 588 aaPredicted RBP18.71■□□□□ 0.59
LINC01238-205ENST00000567549 RALGPS1Q5JS13 557 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 APTXQ7Z2E3 356 aaKnown RBP18.71■□□□□ 0.59
LINC01238-205ENST00000567549 NDUFAF2Q8N183 169 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 TSEN2Q8NCE0 465 aaKnown RBP18.71■□□□□ 0.59
LINC01238-205ENST00000567549 OR56A4Q8NGH8 313 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 KIAA1524Q8TCG1 905 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 VOPP1Q96AW1 172 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 TMEM159Q96B96 161 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 ZNF653Q96CK0 615 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 NAF1Q96HR8 494 aaKnown RBP18.71■□□□□ 0.59
LINC01238-205ENST00000567549 PSKH2Q96QS6 385 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 CLPBQ9H078 707 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 TCEAL2Q9H3H9 227 aaPredicted RBP18.71■□□□□ 0.59
LINC01238-205ENST00000567549 ASCL3Q9NQ33 180 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 COQ6Q9Y2Z9 468 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 RAI2Q9Y5P3 530 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 RP1P56715 2156 aa18.71■□□□□ 0.59
LINC01238-205ENST00000567549 ANKRD36A6QL64 1941 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 SOCS5O75159 536 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 PNLIPP16233 465 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 MIPP30301 263 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 SCNN1BP51168 640 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 OGDHQ02218 1023 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 LBRQ14739 615 aaKnown RBP18.7■□□□□ 0.58
LINC01238-205ENST00000567549 ALG11Q2TAA5 492 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 PERM1Q5SV97 790 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 AFMIDQ63HM1 303 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 TMCO3Q6UWJ1 677 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 DPPA4Q7L190 304 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 TSACCQ96A04 125 aaPredicted RBP18.7■□□□□ 0.58
LINC01238-205ENST00000567549 ECHDC3Q96DC8 303 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 IQCDQ96DY2 449 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 BBC3Q96PG8 261 aaPredicted RBP18.7■□□□□ 0.58
LINC01238-205ENST00000567549 RBM15Q96T37 977 aaKnown RBP eCLIP18.7■□□□□ 0.58
LINC01238-205ENST00000567549 SYT11Q9BT88 431 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 HAUS4Q9H6D7 363 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 WDR26Q9H7D7 661 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 GPATCH2LQ9NWQ4 482 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 OR1A2Q9Y585 309 aa18.7■□□□□ 0.58
LINC01238-205ENST00000567549 LRRK1Q38SD2 2015 aa18.69■□□□□ 0.58
LINC01238-205ENST00000567549 RECQL5O94762 991 aaPredicted RBP18.69■□□□□ 0.58
LINC01238-205ENST00000567549 CYP2A6P11509 494 aaPredicted RBP18.69■□□□□ 0.58
LINC01238-205ENST00000567549 VAC14Q08AM6 782 aa18.69■□□□□ 0.58
LINC01238-205ENST00000567549 PIGHQ14442 188 aaPredicted RBP18.69■□□□□ 0.58
LINC01238-205ENST00000567549 ANO6Q4KMQ2 910 aa18.69■□□□□ 0.58
LINC01238-205ENST00000567549 FOXR1Q6PIV2 292 aa18.69■□□□□ 0.58
LINC01238-205ENST00000567549 TAF8Q7Z7C8 310 aa18.69■□□□□ 0.58
LINC01238-205ENST00000567549 LRRC49Q8IUZ0 686 aa18.69■□□□□ 0.58
LINC01238-205ENST00000567549 SPOCK2Q92563 424 aa18.69■□□□□ 0.58
LINC01238-205ENST00000567549 KCTD15Q96SI1 283 aaPredicted RBP18.69■□□□□ 0.58
LINC01238-205ENST00000567549 TAS2R14Q9NYV8 317 aa18.69■□□□□ 0.58
LINC01238-205ENST00000567549 AKAP7Q9P0M2 348 aaPredicted RBP18.69■□□□□ 0.58
LINC01238-205ENST00000567549 SIRPGQ9P1W8 387 aa18.69■□□□□ 0.58
LINC01238-205ENST00000567549 BPTFQ12830 3046 aa18.69■□□□□ 0.58
LINC01238-205ENST00000567549 NTN3O00634 580 aaPredicted RBP18.68■□□□□ 0.58
LINC01238-205ENST00000567549 PLD2O14939 933 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 BUB1BO60566 1050 aaPredicted RBP18.68■□□□□ 0.58
LINC01238-205ENST00000567549 TNFSF15O95150 251 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 SERPINC1P01008 464 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 GLB1P16278 677 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 ITIH2P19823 946 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 INHBCP55103 352 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 ARHGEF7Q14155 803 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 ACOX1Q15067 660 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 CAVIN1Q6NZI2 390 aaKnown RBP18.68■□□□□ 0.58
LINC01238-205ENST00000567549 CRTC1Q6UUV9 634 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 LIPIQ6XZB0 460 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 CLEC14AQ86T13 490 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 KYQ8NBH2 561 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 NETO2Q8NC67 525 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 CCDC74AQ96AQ1 378 aa18.68■□□□□ 0.58
LINC01238-205ENST00000567549 PHPT1Q9NRX4 125 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms