RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-208ENST00000567264 TPSAB1Q15661 275 aa22.8■■□□□ 1.24
UBFD1-208ENST00000567264 TBC1D3GQ6DHY5 549 aa22.8■■□□□ 1.24
UBFD1-208ENST00000567264 TBC1D3CQ6IPX1 549 aa22.8■■□□□ 1.24
UBFD1-208ENST00000567264 RANBP10Q6VN20 620 aa22.8■■□□□ 1.24
UBFD1-208ENST00000567264 PPP1R21Q6ZMI0 780 aa22.8■■□□□ 1.24
UBFD1-208ENST00000567264 DPPA4Q7L190 304 aa22.8■■□□□ 1.24
UBFD1-208ENST00000567264 TBC1D3Q8IZP1 549 aaPredicted RBP22.8■■□□□ 1.24
UBFD1-208ENST00000567264 MMGT1Q8N4V1 131 aa22.8■■□□□ 1.24
UBFD1-208ENST00000567264 ZBTB44Q8NCP5 570 aa22.8■■□□□ 1.24
UBFD1-208ENST00000567264 MCCC1Q96RQ3 725 aaPredicted RBP22.8■■□□□ 1.24
UBFD1-208ENST00000567264 B4GALT6Q9UBX8 382 aa22.8■■□□□ 1.24
UBFD1-208ENST00000567264 MBD1Q9UIS9 605 aaPredicted RBP22.8■■□□□ 1.24
UBFD1-208ENST00000567264 CAPN8A6NHC0 703 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 EFCAB8A8MWE9 144 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 SPINT1O43278 529 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 SUN1O94901 812 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 VIPR1P32241 457 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 HNF1BP35680 557 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 MMP12P39900 470 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 CDK16Q00536 496 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 SEMG2Q02383 582 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 RPL6Q02878 288 aaKnown RBP22.79■■□□□ 1.24
UBFD1-208ENST00000567264 OLIG2Q13516 323 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 TMEM52BQ4KMG9 183 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 NEK5Q6P3R8 708 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 CEP68Q76N32 757 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 PCGF5Q86SE9 256 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 CXorf40AQ8TE69 158 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 SRPK1Q96SB4 655 aaKnown RBP22.79■■□□□ 1.24
UBFD1-208ENST00000567264 GGT7Q9UJ14 662 aa22.79■■□□□ 1.24
UBFD1-208ENST00000567264 TPX2Q9ULW0 747 aaKnown RBP22.79■■□□□ 1.24
UBFD1-208ENST00000567264 PLXND1Q9Y4D7 1925 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 EML5Q05BV3 1969 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 A8MX80 341 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 DNALI1O14645 258 aaPredicted RBP22.78■■□□□ 1.24
UBFD1-208ENST00000567264 RNGTTO60942 597 aaKnown RBP22.78■■□□□ 1.24
UBFD1-208ENST00000567264 BCKDHBP21953 392 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 MAGEA6P43360 314 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 SARNPP82979 210 aaKnown RBP22.78■■□□□ 1.24
UBFD1-208ENST00000567264 SRSF5Q13243 272 aaKnown RBP22.78■■□□□ 1.24
UBFD1-208ENST00000567264 ARHGEF7Q14155 803 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 KCNJ11Q14654 390 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 KIAA1161Q6NSJ0 714 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 ZC3H14Q6PJT7 736 aaKnown RBP22.78■■□□□ 1.24
UBFD1-208ENST00000567264 NOA1Q8NC60 698 aaKnown RBP22.78■■□□□ 1.24
UBFD1-208ENST00000567264 CPT1BQ92523 772 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 ERP44Q9BS26 406 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 WRAP53Q9BUR4 548 aaKnown RBP22.78■■□□□ 1.24
UBFD1-208ENST00000567264 TRIM31Q9BZY9 425 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 RAB17Q9H0T7 212 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 PCED1AQ9H1Q7 454 aa22.78■■□□□ 1.24
UBFD1-208ENST00000567264 UTP11Q9Y3A2 253 aaKnown RBP22.78■■□□□ 1.24
UBFD1-208ENST00000567264 NPIPB15A6NHN6 443 aaPredicted RBP22.77■■□□□ 1.24
UBFD1-208ENST00000567264 H0Y858 1186 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 HRO43593 1189 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 IZUMO3Q5VZ72 239 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 HORMAD1Q86X24 394 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 PPIL6Q8IXY8 311 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 DNAAF3Q8N9W5 541 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 SNF8Q96H20 258 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 SMIM14Q96QK8 99 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 LYSMD1Q96S90 227 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 LRRC1Q9BTT6 524 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 C6orf106Q9H6K1 298 aaPredicted RBP22.77■■□□□ 1.24
UBFD1-208ENST00000567264 ARNT2Q9HBZ2 717 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 HACD3Q9P035 362 aa22.77■■□□□ 1.24
UBFD1-208ENST00000567264 A0A1W2PQU0 124 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 NDC80O14777 642 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 LILRB5O75023 590 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 ELFN1P0C7U0 828 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 PIRTP0C851 137 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 RPS21P63220 83 aaKnown RBP22.76■■□□□ 1.23
UBFD1-208ENST00000567264 CDH17Q12864 832 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 RALGDSQ12967 914 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 PTPRRQ15256 657 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 KIAA0895LQ68EN5 471 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 LPCAT2Q7L5N7 544 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 PRSS33Q8NF86 280 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 CADM4Q8NFZ8 388 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 OR52K1Q8NGK4 314 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 MAGEE1Q9HCI5 957 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 NUMA1Q14980 2115 aa22.76■■□□□ 1.23
UBFD1-208ENST00000567264 C1orf232A0A0U1RR37 186 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 TCRBV7S3A2A0A539 114 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 AP3B1O00203 1094 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 MMP20O60882 483 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 HEXIM1O94992 359 aaKnown RBP22.75■■□□□ 1.23
UBFD1-208ENST00000567264 FSBPO95073 299 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 ZNF30P17039 623 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 IVDP26440 423 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 LIG3P49916 1009 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 CCR5P51681 352 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 PPP2CBP62714 309 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 PPP2CAP67775 309 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 SIM2Q14190 667 aaPredicted RBP22.75■■□□□ 1.23
UBFD1-208ENST00000567264 ELF2Q15723 593 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 CNGA3Q16281 694 aa22.75■■□□□ 1.23
UBFD1-208ENST00000567264 GLE1Q53GS7 698 aaKnown RBP22.75■■□□□ 1.23
UBFD1-208ENST00000567264 RNASEH2BQ5TBB1 312 aaKnown RBP22.75■■□□□ 1.23
UBFD1-208ENST00000567264 ANKRD22Q5VYY1 191 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms