RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 CBX4O00257 560 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 HDAC3O15379 428 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 MAGEC1O60732 1142 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 SKAP2O75563 359 aaPredicted RBP12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 GOT2P00505 430 aaKnown RBP12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 GNRH1P01148 92 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 LEPRP48357 1165 aaKnown RBP12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 KCNC1P48547 511 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 POU4F1Q01851 419 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 GNA12Q03113 381 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 RING1Q06587 406 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 PLD1Q13393 1074 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 TBCCQ15814 346 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 SH2D4BQ5SQS7 431 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 SPOUT1Q5T280 376 aaKnown RBP12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 LINGO4Q6UY18 593 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 TRIM67Q6ZTA4 783 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 DEFB107AQ8IZN7 70 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 ARHGAP24Q8N264 748 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 CATSPER2Q96P56 530 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 CLSTN3Q9BQT9 956 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 MMADHCQ9H3L0 296 aaPredicted RBP12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 ALG9Q9H6U8 611 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 PDFQ9HBH1 243 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 GTSE1Q9NYZ3 720 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 ANKRD12Q6UB98 2062 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 S1PR4O95977 384 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 CORO1AP31146 461 aaKnown RBP12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 RAP1GDS1P52306 607 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 KLF10Q13118 480 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 DNAL1Q4LDG9 190 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 TCHHL1Q5QJ38 904 aaPredicted RBP12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 EGFL6Q8IUX8 553 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 LRRC43Q8N309 656 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 RDH11Q8TC12 318 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 RSRC1Q96IZ7 334 aaKnown RBP12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 MID2Q9UJV3 735 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 SORCS3Q9UPU3 1222 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 SSX2IPQ9Y2D8 614 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 VWA7Q9Y334 891 aa12.28□□□□□ -0.44
SCAMP2-207ENST00000566480 C5orf42Q9H799 3197 aa12.27□□□□□ -0.44
SCAMP2-207ENST00000566480 CCDC162PA2VCL2 907 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 AIM2O14862 343 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 MT-CO1P00395 513 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 PDHA1P08559 390 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 COL6A2P12110 1019 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 COX4I1P13073 169 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 ELAVL2Q12926 359 aaKnown RBP12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 FAM83EQ2M2I3 478 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 USP41Q3LFD5 358 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 SNX31Q8N9S9 440 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 CALML6Q8TD86 181 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 PDCD6IPQ8WUM4 868 aaKnown RBP12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 RMDN1Q96DB5 314 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 TTC1Q99614 292 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 MRPL57Q9BQC6 102 aaKnown RBP12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 MRPL9Q9BYD2 267 aaKnown RBP12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 PITPNM1O00562 1244 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 CIB2O75838 187 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 CSPG5O95196 566 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 ATP5BP06576 529 aaKnown RBP12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 SERPINF2P08697 491 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 SPATA31D3P0C874 917 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 HMGA1P17096 107 aaKnown RBP12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 ITGAXP20702 1163 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 MAPKAPK2P49137 400 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 YBEYP58557 167 aaPredicted RBP12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 PRKAA1Q13131 559 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 NAA25Q14CX7 972 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 FBXO48Q5FWF7 155 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 TECRLQ5HYJ1 363 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 HECTD3Q5T447 861 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 SLC8B1Q6J4K2 584 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 ZNF549Q6P9A3 640 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 SPATA31D4Q6ZUB0 917 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 HPS6Q86YV9 775 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 TADA1Q96BN2 335 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 MIEF2Q96C03 454 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 CMTM5Q96DZ9 223 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 RANBP9Q96S59 729 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 ZBED2Q9BTP6 218 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 C1orf21Q9H246 121 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 FAM96AQ9H5X1 160 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 NMRK1Q9NWW6 199 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 RPL26L1Q9UNX3 145 aaKnown RBP12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 PCDHGC4Q9Y5F7 938 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 SPO11Q9Y5K1 396 aa12.27□□□□□ -0.45
SCAMP2-207ENST00000566480 A0A087X1B8 175 aa12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 A8MT66 165 aa12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 H3BNC9 293 aa12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 H2AFYO75367 372 aaKnown RBP12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 STC2O76061 302 aa12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 BAG2O95816 211 aa12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 BMP1P13497 986 aa12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 ELF1P32519 619 aa12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 MSX2P35548 267 aaPredicted RBP12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 SLC11A2P49281 568 aa12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 CLNS1AP54105 237 aaKnown RBP12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 TAF12Q16514 161 aa12.26□□□□□ -0.45
SCAMP2-207ENST00000566480 KIAA0408Q6ZU52 694 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms