RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 CPNE8Q86YQ8 564 aa23.87■■□□□ 1.41
RAB40C-209ENST00000565511 SFTPA2Q8IWL1 248 aa23.87■■□□□ 1.41
RAB40C-209ENST00000565511 OR1E3Q8WZA6 343 aa23.87■■□□□ 1.41
RAB40C-209ENST00000565511 HSPH1Q92598 858 aa23.87■■□□□ 1.41
RAB40C-209ENST00000565511 PRR11Q96HE9 360 aaPredicted RBP23.87■■□□□ 1.41
RAB40C-209ENST00000565511 EDEM3Q9BZQ6 932 aa23.87■■□□□ 1.41
RAB40C-209ENST00000565511 POLR1BQ9H9Y6 1135 aa23.87■■□□□ 1.41
RAB40C-209ENST00000565511 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.87■■□□□ 1.41
RAB40C-209ENST00000565511 DONSONQ9NYP3 566 aa23.87■■□□□ 1.41
RAB40C-209ENST00000565511 SATB2Q9UPW6 733 aa23.87■■□□□ 1.41
RAB40C-209ENST00000565511 ARHGEF17Q96PE2 2063 aaPredicted RBP23.87■■□□□ 1.41
RAB40C-209ENST00000565511 TMEM202A6NGA9 273 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 RRP8O43159 456 aaKnown RBP23.86■■□□□ 1.41
RAB40C-209ENST00000565511 DXOO77932 396 aaKnown RBP23.86■■□□□ 1.41
RAB40C-209ENST00000565511 SERPINC1P01008 464 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 RARAP10276 462 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 LSSP48449 732 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 SCNN1BP51168 640 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 SRP54P61011 504 aaKnown RBP23.86■■□□□ 1.41
RAB40C-209ENST00000565511 BCL2L1Q07817 233 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 MTM1Q13496 603 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 LBRQ14739 615 aaKnown RBP23.86■■□□□ 1.41
RAB40C-209ENST00000565511 PTPRRQ15256 657 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 FIGNQ5HY92 759 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 C3orf38Q5JPI3 329 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 TMCO4Q5TGY1 634 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 DPPA4Q7L190 304 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 CSPG4P5Q96PW8 444 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 PSKH2Q96QS6 385 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 CCDC3Q9BQI4 270 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 THAP2Q9H0W7 228 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 FGF22Q9HCT0 170 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 MRPL40Q9NQ50 206 aaKnown RBP23.86■■□□□ 1.41
RAB40C-209ENST00000565511 NCKIPSDQ9NZQ3 722 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 GULP1Q9UBP9 304 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 KLQ9UEF7 1012 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 PADI4Q9UM07 663 aa23.86■■□□□ 1.41
RAB40C-209ENST00000565511 H3BRJ5 948 aa23.85■■□□□ 1.41
RAB40C-209ENST00000565511 RASGRP1O95267 797 aa23.85■■□□□ 1.41
RAB40C-209ENST00000565511 MYBL1P10243 752 aa23.85■■□□□ 1.41
RAB40C-209ENST00000565511 CR2P20023 1033 aa23.85■■□□□ 1.41
RAB40C-209ENST00000565511 FANCCQ00597 558 aa23.85■■□□□ 1.41
RAB40C-209ENST00000565511 SLC25A11Q02978 314 aaKnown RBP23.85■■□□□ 1.41
RAB40C-209ENST00000565511 NSUN2Q08J23 767 aaKnown RBP eCLIP23.85■■□□□ 1.41
RAB40C-209ENST00000565511 RFTN1Q14699 578 aaPredicted RBP23.85■■□□□ 1.41
RAB40C-209ENST00000565511 TDRD12Q587J7 1177 aaKnown RBP23.85■■□□□ 1.41
RAB40C-209ENST00000565511 RBM44Q6ZP01 1051 aaKnown RBP23.85■■□□□ 1.41
RAB40C-209ENST00000565511 FSTL5Q8N475 847 aaPredicted RBP23.85■■□□□ 1.41
RAB40C-209ENST00000565511 TRIM11Q96F44 468 aa23.85■■□□□ 1.41
RAB40C-209ENST00000565511 WDR92Q96MX6 357 aa23.85■■□□□ 1.41
RAB40C-209ENST00000565511 FCRL3Q96P31 734 aaPredicted RBP23.85■■□□□ 1.41
RAB40C-209ENST00000565511 LGR4Q9BXB1 951 aa23.85■■□□□ 1.41
RAB40C-209ENST00000565511 PCDH18Q9HCL0 1135 aa23.85■■□□□ 1.41
RAB40C-209ENST00000565511 B4GALT6Q9UBX8 382 aa23.85■■□□□ 1.41
RAB40C-209ENST00000565511 SEPT3Q9UH03 358 aa23.85■■□□□ 1.41
RAB40C-209ENST00000565511 SYCE3A1L190 88 aa23.84■■□□□ 1.41
RAB40C-209ENST00000565511 TMEM110-MUSTN1A8MSY1 372 aa23.84■■□□□ 1.41
RAB40C-209ENST00000565511 PRB1P04280 392 aa23.84■■□□□ 1.41
RAB40C-209ENST00000565511 CCDC74AQ96AQ1 378 aa23.84■■□□□ 1.41
RAB40C-209ENST00000565511 ZNF578Q96N58 590 aaPredicted RBP23.84■■□□□ 1.41
RAB40C-209ENST00000565511 PCDHGC4Q9Y5F7 938 aa23.84■■□□□ 1.41
RAB40C-209ENST00000565511 HTRA2O43464 458 aaPredicted RBP23.83■■□□□ 1.41
RAB40C-209ENST00000565511 MAFKO60675 156 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 ELFN1P0C7U0 828 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 ZNF135P52742 658 aaPredicted RBP23.83■■□□□ 1.41
RAB40C-209ENST00000565511 PCBP4P57723 403 aaKnown RBP23.83■■□□□ 1.41
RAB40C-209ENST00000565511 KIAA1024LP59773 190 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 MAXP61244 160 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 AP1S1P61966 158 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 TRAF2Q12933 501 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 ACAP1Q15027 740 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 ELOCQ15369 112 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 CNGA3Q16281 694 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 B3GNT8Q7Z7M8 397 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 ARL10Q8N8L6 244 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 NAT6Q93015 286 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 LGMNQ99538 433 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.83■■□□□ 1.41
RAB40C-209ENST00000565511 SYNDIG1Q9H7V2 258 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 NOD2Q9HC29 1040 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 MRPL47Q9HD33 250 aaKnown RBP23.83■■□□□ 1.41
RAB40C-209ENST00000565511 GPR34Q9UPC5 381 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 SCN8AQ9UQD0 1980 aa23.83■■□□□ 1.41
RAB40C-209ENST00000565511 UNC13CQ8NB66 2214 aa23.83■■□□□ 1.4
RAB40C-209ENST00000565511 A0A087X0T9 212 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 A0A0U1RQS6 177 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 CFAP69A5D8W1 941 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 NTN3O00634 580 aaPredicted RBP23.82■■□□□ 1.4
RAB40C-209ENST00000565511 CD48P09326 243 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 FAM228BP0C875 321 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 CTSEP14091 401 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 HTR1BP28222 390 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 RPIAP49247 311 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 BLKP51451 505 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 MMRN1Q13201 1228 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 TMCO3Q6UWJ1 677 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 LZTR1Q8N653 840 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 CCL4L1Q8NHW4 92 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 GLMNQ92990 594 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 COQ10AQ96MF6 247 aa23.82■■□□□ 1.4
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