RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 IRF4Q15306 451 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 TSR1Q2NL82 804 aaKnown RBP9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 WSCD2Q2TBF2 565 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 NKAIN2Q5VXU1 208 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 SASS6Q6UVJ0 657 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 LRRC31Q6UY01 552 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 LYSMD3Q7Z3D4 306 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 SFTPA2Q8IWL1 248 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 OR56A4Q8NGH8 313 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 ZDHHC1Q8WTX9 485 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 TFAP2BQ92481 460 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 TSG101Q99816 390 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 CTRCQ99895 268 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 SLC25A23Q9BV35 468 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 OSBPL1AQ9BXW6 950 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 TWSG1Q9GZX9 223 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 SIK2Q9H0K1 926 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 TMEM168Q9H0V1 697 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 THAP9Q9H5L6 903 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 DDIT4Q9NX09 232 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 COX16Q9P0S2 106 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 KCND3Q9UK17 655 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 OR1A2Q9Y585 309 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 HS3ST4Q9Y661 456 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 MRPS18BQ9Y676 258 aaKnown RBP9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 SCN8AQ9UQD0 1980 aa9.11□□□□□ -0.95
VPS9D1-205ENST00000565452 ILVBLA1L0T0 632 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 CDC14CA4D256 554 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 PPP1R3GB7ZBB8 358 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 CACNB4O00305 520 aaPredicted RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 KRIT1O00522 736 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 POLR1CO15160 346 aaPredicted RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 FGF1P05230 155 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 THRAP10827 490 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 F8A1P23610 371 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 TBXAS1P24557 533 aaPredicted RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 OR1E1P30953 314 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 STAT1P42224 750 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 RPL34P49207 117 aaKnown RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 PPM1FP49593 454 aaPredicted RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 SERPINH1P50454 418 aaKnown RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 SUOXP51687 545 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 MCCD1P59942 119 aaPredicted RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 FKBP3Q00688 224 aaKnown RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 RAD51Q06609 339 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 ADAM9Q13443 819 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 SEMA5AQ13591 1074 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 RAPGEF1Q13905 1077 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 POLD3Q15054 466 aaPredicted RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 NR6A1Q15406 480 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 NFKBIBQ15653 356 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 MYLK3Q32MK0 819 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 JMJD6Q6NYC1 403 aaPredicted RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 TMEM270Q6UE05 265 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 C6orf15Q6UXA7 325 aaPredicted RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 ZNF783Q6ZMS7 281 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 C17orf82Q86X59 251 aaPredicted RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 BMPERQ8N8U9 685 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 STK32AQ8WU08 396 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 AHCYL2Q96HN2 611 aaKnown RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 KLHL32Q96NJ5 620 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 WRAP53Q9BUR4 548 aaKnown RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 SPATS2LQ9NUQ6 558 aaKnown RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 PDP2Q9P2J9 529 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 ZNF451Q9Y4E5 1061 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 PCDHB4Q9Y5E5 795 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 PCDHGB7Q9Y5F8 929 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 PCDHGA9Q9Y5G4 932 aaKnown RBP9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 NAV3Q8IVL0 2385 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 PDZD2O15018 2839 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 ABCA2Q9BZC7 2435 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 AKAP9Q99996 3911 aa9.1□□□□□ -0.95
VPS9D1-205ENST00000565452 IGHV1OR21-1A0A087WYE8 117 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 CXorf51AA0A1B0GTR3 108 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 A6NCN8 305 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 DRGXA6NNA5 263 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 A8MU76 341 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 PDE2AO00408 941 aaPredicted RBP9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 CETN3O15182 167 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 DPM1O60762 260 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 PAGE1O75459 146 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 CREG1O75629 220 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 ZMPSTE24O75844 475 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 ECEL1O95672 775 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 UGT2B4P06133 528 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 HOXC4P09017 264 aaPredicted RBP9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 FURINP09958 794 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 CCNYL3P0C7X3 344 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 XPAP23025 273 aaPredicted RBP9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 ERCC5P28715 1186 aaPredicted RBP9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 GKP32189 559 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 IRAK1P51617 712 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 CCL11P51671 97 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 MAZP56270 477 aaKnown RBP9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 PER3P56645 1201 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 RNASE9P60153 205 aaKnown RBP9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 SNRPD1P62314 119 aaKnown RBP9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 GPLD1P80108 840 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 ELP6Q0PNE2 266 aa9.09□□□□□ -0.95
VPS9D1-205ENST00000565452 MTM1Q13496 603 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms