RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ALPIP09923 528 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 CTSEP14091 401 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 PLA2G2AP14555 144 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 FERP16591 822 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 XPAP23025 273 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-213ENST00000565173 HTR1BP28222 390 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 MLLT3P42568 568 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-213ENST00000565173 RHDQ02161 417 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 CLN3Q13286 438 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 SPIDRQ14159 915 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 ERAP2Q6P179 960 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 FOXR1Q6PIV2 292 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 RFX8Q6ZV50 586 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 RD3Q7Z3Z2 195 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 ZNF605Q86T29 641 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 SFTPA2Q8IWL1 248 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 PELI3Q8N2H9 469 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 CBARPQ8N350 705 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-213ENST00000565173 ARL14Q8N4G2 192 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 NPWQ8N729 165 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 GPR156Q8NFN8 814 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 SCG3Q8WXD2 468 aaKnown RBP8.63□□□□□ -1.03
CAPN3-213ENST00000565173 OR1E3Q8WZA6 343 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 SPOCK2Q92563 424 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 CCDC74AQ96AQ1 378 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 PDXPQ96GD0 296 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 LIN37Q96GY3 246 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-213ENST00000565173 WDR92Q96MX6 357 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 KCTD15Q96SI1 283 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-213ENST00000565173 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.63□□□□□ -1.03
CAPN3-213ENST00000565173 SNRNP25Q9BV90 132 aaKnown RBP8.63□□□□□ -1.03
CAPN3-213ENST00000565173 LGR4Q9BXB1 951 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 DHX35Q9H5Z1 703 aaKnown RBP8.63□□□□□ -1.03
CAPN3-213ENST00000565173 ATP13A3Q9H7F0 1226 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 MRPL40Q9NQ50 206 aaKnown RBP8.63□□□□□ -1.03
CAPN3-213ENST00000565173 PARVAQ9NVD7 372 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 ANO10Q9NW15 660 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 DONSONQ9NYP3 566 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 KLQ9UEF7 1012 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 PCSK1NQ9UHG2 260 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 GPR34Q9UPC5 381 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 AP4E1Q9UPM8 1137 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 ARHGAP42A6NI28 874 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 TMCO5BA8MYB1 307 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 EIF3CLB5ME19 914 aaKnown RBP8.62□□□□□ -1.03
CAPN3-213ENST00000565173 D6RAR5 112 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 EEF2KO00418 725 aaKnown RBP8.62□□□□□ -1.03
CAPN3-213ENST00000565173 PLD2O14939 933 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 ATMINO43313 823 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-213ENST00000565173 NOBOXO60393 691 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 PEX11BO96011 259 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 TNFP01375 233 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 FUCA1P04066 466 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 PCCBP05166 539 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 ERCC2P18074 760 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 CDK11BP21127 795 aaKnown RBP8.62□□□□□ -1.03
CAPN3-213ENST00000565173 TNFAIP3P21580 790 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 PSMA2P25787 234 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 SERPINA4P29622 427 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 MIPP30301 263 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 CCKBRP32239 447 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 UGT1A5P35504 534 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 HCAR3P49019 387 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 ZFP36L1Q07352 338 aaKnown RBP8.62□□□□□ -1.03
CAPN3-213ENST00000565173 IL10RBQ08334 325 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 DPYSQ14117 519 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 RFTN1Q14699 578 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-213ENST00000565173 STX1AQ16623 288 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 E4F1Q66K89 784 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-213ENST00000565173 SASS6Q6UVJ0 657 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 GKN2Q86XP6 184 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 ANKRD20A12PQ8NF67 263 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 OR6C4Q8NGE1 309 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 FNIP1Q8TF40 1166 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 CCDC97Q96F63 343 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-213ENST00000565173 PSKH2Q96QS6 385 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 EIF3CQ99613 913 aaKnown RBP8.62□□□□□ -1.03
CAPN3-213ENST00000565173 FOXP3Q9BZS1 431 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 TMEM168Q9H0V1 697 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 LRRN3Q9H3W5 708 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 FGF22Q9HCT0 170 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 RTN4Q9NQC3 1192 aaKnown RBP8.62□□□□□ -1.03
CAPN3-213ENST00000565173 CWC15Q9P013 229 aaKnown RBP8.62□□□□□ -1.03
CAPN3-213ENST00000565173 APPL1Q9UKG1 709 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 MYO6Q9UM54 1294 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 DOLKQ9UPQ8 538 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 PCDHGA7Q9Y5G6 932 aa8.62□□□□□ -1.03
CAPN3-213ENST00000565173 TTC24A2A3L6 582 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 A8MX80 341 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 DDX3XO00571 662 aaKnown RBP eCLIP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 TNFRSF10CO14798 259 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 HTRA2O43464 458 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 LRCH4O75427 683 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 FTLP02792 175 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 RPLP0P05388 317 aaKnown RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 CCDC172P0C7W6 258 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 GZMAP12544 262 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 HGFP14210 728 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 TCF4P15884 667 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 PNLIPP16233 465 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms