RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 NSUN2Q08J23 767 aaKnown RBP eCLIP17.77■□□□□ 0.44
NME3-205ENST00000563854 ACOX1Q15067 660 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 HADHQ16836 314 aaKnown RBP17.77■□□□□ 0.44
NME3-205ENST00000563854 ALG11Q2TAA5 492 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 DENND2CQ68D51 928 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 PDZD3Q86UT5 571 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 CPNE8Q86YQ8 564 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 PLA2G15Q8NCC3 412 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 GLMNQ92990 594 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 ECHDC3Q96DC8 303 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 NSMCE3Q96MG7 304 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 CLPBQ9H078 707 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 CTTNBP2NLQ9P2B4 639 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 GULP1Q9UBP9 304 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 SALL4Q9UJQ4 1053 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 PCDHGC4Q9Y5F7 938 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.77■□□□□ 0.444e-11■■□□□ 14.2
NME3-205ENST00000563854 ZFYVE26Q68DK2 2539 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.76■□□□□ 0.43
NME3-205ENST00000563854 TMEM110-MUSTN1A8MSY1 372 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 LMO7DNF2Z398 122 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 TPP1O14773 563 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 YY2O15391 372 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 TLX3O43711 291 aaPredicted RBP17.76■□□□□ 0.43
NME3-205ENST00000563854 MAFKO60675 156 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 RASGRP1O95267 797 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 CD48P09326 243 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 RPIAP49247 311 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 PEX5P50542 639 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 HK3P52790 923 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 MTM1Q13496 603 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 RTP5Q14D33 572 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 C6orf132Q5T0Z8 1188 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 ZFYVE27Q5T4F4 411 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 LIPIQ6XZB0 460 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 DPPA4Q7L190 304 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 SLC35F3Q8IY50 421 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 PGBD5Q8N414 524 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 PCDH19Q8TAB3 1148 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 CRELD1Q96HD1 420 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 WDR92Q96MX6 357 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 DEF6Q9H4E7 631 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 B4GALT6Q9UBX8 382 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 ACACAQ13085 2346 aa17.76■□□□□ 0.43
NME3-205ENST00000563854 ITPR1Q14643 2758 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 CACNB4O00305 520 aaPredicted RBP17.75■□□□□ 0.43
NME3-205ENST00000563854 TRAFD1O14545 582 aaPredicted RBP17.75■□□□□ 0.43
NME3-205ENST00000563854 MFSD11O43934 449 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 USP12O75317 370 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 MAP3K6O95382 1288 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 PEX11BO96011 259 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 MPOP05164 745 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 TGM2P21980 687 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 HSPA9P38646 679 aaKnown RBP17.75■□□□□ 0.43
NME3-205ENST00000563854 MMP13P45452 471 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 ABCG1P45844 678 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 SRP54P61011 504 aaKnown RBP17.75■□□□□ 0.43
NME3-205ENST00000563854 ITKQ08881 620 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 ELOCQ15369 112 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 PERM1Q5SV97 790 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 MARC1Q5VT66 337 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 CDCP2Q5VXM1 449 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 ESRP1Q6NXG1 681 aaKnown RBP17.75■□□□□ 0.43
NME3-205ENST00000563854 CACTIN-AS1Q8N1I8 211 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 FSTL5Q8N475 847 aaPredicted RBP17.75■□□□□ 0.43
NME3-205ENST00000563854 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.75■□□□□ 0.43
NME3-205ENST00000563854 ATL2Q8NHH9 583 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 CTNNBL1Q8WYA6 563 aaPredicted RBP17.75■□□□□ 0.43
NME3-205ENST00000563854 PDXPQ96GD0 296 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 TBATAQ96M53 351 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 NUDCD1Q96RS6 583 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 BOCQ9BWV1 1114 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 PACSIN1Q9BY11 444 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 SUDS3Q9H7L9 328 aaPredicted RBP17.75■□□□□ 0.43
NME3-205ENST00000563854 NOD2Q9HC29 1040 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 NT5MQ9NPB1 228 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 MOSPD1Q9UJG1 213 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 CELSR3Q9NYQ7 3312 aa17.75■□□□□ 0.43
NME3-205ENST00000563854 A0A087WV48 116 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 EME2A4GXA9 379 aaPredicted RBP17.74■□□□□ 0.43
NME3-205ENST00000563854 GOLGA6CA6NDK9 693 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 GOLGA6BA6NDN3 693 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 SOCS5O75159 536 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 ALPIP09923 528 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 GOLGA6DP0CG33 693 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 GABREP78334 506 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 TRAF2Q12933 501 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 AGERQ15109 404 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 ATP13A4Q4VNC1 1196 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 KCTD16Q68DU8 428 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 LRRC69Q6ZNQ3 347 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 KYQ8NBH2 561 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 KCTD6Q8NC69 237 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 SCG3Q8WXD2 468 aaKnown RBP17.74■□□□□ 0.43
NME3-205ENST00000563854 MGME1Q9BQP7 344 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 GOLGA6AQ9NYA3 693 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 PADI4Q9UM07 663 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 TTLL3Q9Y4R7 772 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 NBEAQ8NFP9 2946 aa17.74■□□□□ 0.43
NME3-205ENST00000563854 SHROOM3Q8TF72 1996 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms