RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 COPZ2Q9P299 210 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 PI4KBQ9UBF8 816 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 PLA2G4CQ9UP65 541 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 SAMD4AQ9UPU9 718 aaKnown RBP6.28□□□□□ -1.4
CLK3-212ENST00000563418 POLHQ9Y253 713 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 ST14Q9Y5Y6 855 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 FAM205CA6NFA0 338 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 SUPT3HB4E1H0 165 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 SUPT7LO94864 414 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 CD2P06729 351 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 TCF3P15923 654 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 LBPP18428 481 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 RPS3P23396 243 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLK3-212ENST00000563418 HTR2AP28223 471 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 PTGIRP43119 386 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 RALGPS1Q5JS13 557 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 ZNF549Q6P9A3 640 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 CYP20A1Q6UW02 462 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 DEF8Q6ZN54 512 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 LRRC55Q6ZSA7 311 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 ZNF34Q8IZ26 560 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 MCOLN2Q8IZK6 566 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 NKX2-3Q8TAU0 364 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 LIN28AQ9H9Z2 209 aaKnown RBP6.28□□□□□ -1.4
CLK3-212ENST00000563418 KCNK13Q9HB14 408 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 CHST7Q9NS84 486 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLK3-212ENST00000563418 NIP7Q9Y221 180 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLK3-212ENST00000563418 PCDHB12Q9Y5F1 795 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 FANCGO15287 622 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 PMPCBO75439 489 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 S100A8P05109 93 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 UQCRC1P31930 480 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 DLG2Q15700 870 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 PCSK7Q16549 785 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 DCAF6Q58WW2 860 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 DHRS4L2Q6PKH6 230 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 NAPRTQ6XQN6 538 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 CXXC5Q7LFL8 322 aaKnown RBP6.28□□□□□ -1.4
CLK3-212ENST00000563418 C15orf40Q8WUR7 153 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 RFT1Q96AA3 541 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 ACTR6Q9GZN1 396 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 SIK2Q9H0K1 926 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 LIN7BQ9HAP6 207 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 POLR3HQ9Y535 204 aaPredicted RBP6.28□□□□□ -1.4
CLK3-212ENST00000563418 A0A088AWK7 358 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 KRT33AO76009 404 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 ZNF182P17025 639 aaPredicted RBP6.28□□□□□ -1.4
CLK3-212ENST00000563418 OR3A3P47888 321 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 ALDH7A1P49419 539 aaKnown RBP6.28□□□□□ -1.4
CLK3-212ENST00000563418 CENPAP49450 140 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLK3-212ENST00000563418 MOXD1Q6UVY6 613 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 IGFN1Q86VF2 1251 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 OR5H6Q8NGV6 325 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 TM9SF2Q99805 663 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 XPNPEP3Q9NQH7 507 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 DISP2A7MBM2 1401 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 DISP1Q96F81 1524 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 SGTAO43765 313 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 RASAL1O95294 804 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 RPA4Q13156 261 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 IKBKEQ14164 716 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 BTG3Q14201 252 aaPredicted RBP6.28□□□□□ -1.4
CLK3-212ENST00000563418 ACOX1Q15067 660 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 CDK10Q15131 360 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 KYAT1Q16773 422 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 STRIP1Q5VSL9 837 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 EIF5AL1Q6IS14 154 aaKnown RBP6.28□□□□□ -1.4
CLK3-212ENST00000563418 DRICH1Q6PGQ1 229 aaPredicted RBP6.28□□□□□ -1.4
CLK3-212ENST00000563418 UTS2BQ765I0 119 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 LURAP1Q96LR2 239 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 FAM83DQ9H4H8 585 aa6.28□□□□□ -1.4
CLK3-212ENST00000563418 MAGED1Q9Y5V3 778 aaPredicted RBP6.28□□□□□ -1.4
CLK3-212ENST00000563418 ZNF335Q9H4Z2 1342 aaPredicted RBP6.28□□□□□ -1.4
CLK3-212ENST00000563418 A0A1B0GVI7 797 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 VILLO15195 856 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 SGCEO43556 437 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 MTA2O94776 668 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 CD36P16671 472 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 GSTM5P46439 218 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 TXNL4AP83876 142 aaKnown RBP6.27□□□□□ -1.4
CLK3-212ENST00000563418 FAM187BQ17R55 369 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 SYVN1Q86TM6 617 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 ZZZ3Q8IYH5 903 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 DPP10Q8N608 796 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 SH3RF3Q8TEJ3 882 aaPredicted RBP6.27□□□□□ -1.4
CLK3-212ENST00000563418 SPOCK2Q92563 424 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 PEX13Q92968 403 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 CAMKK2Q96RR4 588 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 SEZ6LQ9BYH1 1024 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 UCK2Q9BZX2 261 aa6.27□□□□□ -1.4
CLK3-212ENST00000563418 HMX3A6NHT5 357 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 HACD1B0YJ81 288 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 ZMPSTE24O75844 475 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 ANXA9O76027 345 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 FOSL2P15408 326 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 ZNF37AP17032 561 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 IGFBP5P24593 272 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 SLC5A2P31639 672 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms