RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 AMACRQ9UHK6 382 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 TTLL3Q9Y4R7 772 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 RAI2Q9Y5P3 530 aa28.43■■■□□ 2.14
NME3-203ENST00000563367 A0A1W2PQ67 120 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 CFAP69A5D8W1 941 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 LZTS3O60299 673 aaPredicted RBP28.42■■■□□ 2.14
NME3-203ENST00000563367 JCHAINP01591 159 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 GM2AP17900 193 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 SPINK2P20155 84 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 ADCY2Q08462 1091 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 NIPAL4Q0D2K0 466 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 ZBTB17Q13105 803 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 AGERQ15109 404 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 PTPRRQ15256 657 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 KAZNQ674X7 775 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 B4GALNT4Q76KP1 1039 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 IFT43Q96FT9 208 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 IL12RB2Q99665 862 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 DESI2Q9BSY9 194 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 UCKL1Q9NWZ5 548 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 DNAJC28Q9NX36 388 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 SAE1Q9UBE0 346 aaPredicted RBP28.42■■■□□ 2.14
NME3-203ENST00000563367 ANGPTL2Q9UKU9 493 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 PHTF1Q9UMS5 762 aa28.42■■■□□ 2.14
NME3-203ENST00000563367 A0A0U1RQJ8 604 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 CST8O60676 142 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 PDHA1P08559 390 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 DGKAP23743 735 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 NAP1L1P55209 391 aaKnown RBP28.41■■■□□ 2.14
NME3-203ENST00000563367 IFI35P80217 286 aaPredicted RBP28.41■■■□□ 2.14
NME3-203ENST00000563367 AP1B1Q10567 949 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 PDK1Q15118 436 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 ARMC12Q5T9G4 340 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 KIAA1328Q86T90 577 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 RCOR2Q8IZ40 523 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 CNTD1Q8N815 330 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 PIH1D2Q8WWB5 315 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 FTSJ1Q9UET6 329 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 KLF15Q9UIH9 416 aa28.41■■■□□ 2.14
NME3-203ENST00000563367 LRP4O75096 1905 aa28.4■■■□□ 2.14
NME3-203ENST00000563367 GOLGA8CPA6NN73 597 aa28.4■■■□□ 2.14
NME3-203ENST00000563367 TNFSF14O43557 240 aa28.4■■■□□ 2.14
NME3-203ENST00000563367 HYAL3O43820 417 aaPredicted RBP28.4■■■□□ 2.14
NME3-203ENST00000563367 FZD6O60353 706 aa28.4■■■□□ 2.14
NME3-203ENST00000563367 PIAS2O75928 621 aa28.4■■■□□ 2.14
NME3-203ENST00000563367 RECQL5O94762 991 aaPredicted RBP28.4■■■□□ 2.14
NME3-203ENST00000563367 ZRANB2O95218 330 aaKnown RBP eCLIP28.4■■■□□ 2.147e-7■■■■□ 23.2
NME3-203ENST00000563367 ELFN1P0C7U0 828 aa28.4■■■□□ 2.14
NME3-203ENST00000563367 PECAM1P16284 738 aaPredicted RBP28.4■■■□□ 2.14
NME3-203ENST00000563367 EIF2B5Q13144 721 aaKnown RBP28.4■■■□□ 2.14
NME3-203ENST00000563367 CALR3Q96L12 384 aaKnown RBP28.4■■■□□ 2.14
NME3-203ENST00000563367 hCG_1818297A0A087WSY0 165 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 NEBLO76041 1014 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 CTPS1P17812 591 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 CES1P23141 567 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 VIPR1P32241 457 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 YPEL5P62699 121 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 TFDP2Q14188 446 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 CNGA3Q16281 694 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 TFDP3Q5H9I0 405 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 PARGQ86W56 976 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 CHCHD4Q8N4Q1 142 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 EXD1Q8NHP7 514 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 SMIM14Q96QK8 99 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 CEP41Q9BYV8 373 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 TRIM10Q9UDY6 481 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 PNMA8BQ9ULN7 279 aaPredicted RBP28.39■■■□□ 2.14
NME3-203ENST00000563367 APOBEC2Q9Y235 224 aaKnown RBP28.39■■■□□ 2.14
NME3-203ENST00000563367 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.39■■■□□ 2.14
NME3-203ENST00000563367 PPIL1Q9Y3C6 166 aa28.39■■■□□ 2.14
NME3-203ENST00000563367 GOLGA4Q13439 2230 aaKnown RBP28.39■■■□□ 2.14
NME3-203ENST00000563367 GRID2IPA4D2P6 1211 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 NPIPB15A6NHN6 443 aaPredicted RBP28.38■■■□□ 2.13
NME3-203ENST00000563367 PPP1R12AO14974 1030 aaPredicted RBP28.38■■■□□ 2.13
NME3-203ENST00000563367 LDOC1O95751 146 aaPredicted RBP28.38■■■□□ 2.13
NME3-203ENST00000563367 CSF2P04141 144 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 MMP2P08253 660 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 NME1P15531 152 aaKnown RBP28.38■■■□□ 2.13
NME3-203ENST00000563367 LHCGRP22888 699 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 CTNNA1P35221 906 aaKnown RBP28.38■■■□□ 2.13
NME3-203ENST00000563367 THOP1P52888 689 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 INPP5AQ14642 412 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 RAB44Q7Z6P3 723 aaPredicted RBP28.38■■■□□ 2.13
NME3-203ENST00000563367 CCDC50Q8IVM0 306 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 LRRC57Q8N9N7 239 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 PLA2G15Q8NCC3 412 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 KIAA1524Q8TCG1 905 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 ADAMTS14Q8WXS8 1223 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 SCRN2Q96FV2 425 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 CNDP2Q96KP4 475 aaKnown RBP28.38■■■□□ 2.13
NME3-203ENST00000563367 COQ10AQ96MF6 247 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 MCCC1Q96RQ3 725 aaPredicted RBP28.38■■■□□ 2.13
NME3-203ENST00000563367 SCNM1Q9BWG6 230 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 HAUS2Q9NVX0 235 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 CHKBQ9Y259 395 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 PCDHA3Q9Y5H8 950 aa28.38■■■□□ 2.13
NME3-203ENST00000563367 TPRP12270 2363 aaKnown RBP28.38■■■□□ 2.13
NME3-203ENST00000563367 PLXNB3Q9ULL4 1909 aa28.37■■■□□ 2.13
NME3-203ENST00000563367 A0A0U1RQS6 177 aa28.37■■■□□ 2.13
NME3-203ENST00000563367 TRIM38O00635 465 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms