RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 FEM1BQ9UK73 627 aa5.57□□□□□ -1.52
CAPN3-211ENST00000562199 ZNRF3Q9ULT6 936 aa5.57□□□□□ -1.52
CAPN3-211ENST00000562199 LIPT1Q9Y234 373 aa5.57□□□□□ -1.52
CAPN3-211ENST00000562199 NOX1Q9Y5S8 564 aa5.57□□□□□ -1.52
CAPN3-211ENST00000562199 NPFFR2Q9Y5X5 522 aa5.57□□□□□ -1.52
CAPN3-211ENST00000562199 SPACA6W5XKT8 324 aa5.57□□□□□ -1.52
CAPN3-211ENST00000562199 TIAM2Q8IVF5 1701 aa5.57□□□□□ -1.52
CAPN3-211ENST00000562199 ABCC12Q96J65 1359 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 FAM205AQ6ZU69 1335 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 LTBP3Q9NS15 1303 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 IRS2Q9Y4H2 1338 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ARGFXA6NJG6 315 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 H3BML4 177 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 SYT5O00445 386 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 GPR171O14626 319 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ZNF197O14709 1029 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 KCNN4O15554 427 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 MED7O43513 233 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 B3GALT2O43825 422 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 SUSD5O60279 629 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 CDK14O94921 469 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 SNAPINO95295 136 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 B3GALT4O96024 378 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 PRNPP04156 253 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ALPPP05187 535 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 CSF1P09603 554 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ALPPL2P10696 532 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 TSHRP16473 764 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ITGA2P17301 1181 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 MDH1P40925 334 aaKnown RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 EIF2DP41214 584 aaKnown RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 CASP3P42574 277 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 MAGEA1P43355 309 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 SYKP43405 635 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 SLC11A1P49279 550 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 PCYT1AP49585 367 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ANXA11P50995 505 aaKnown RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 YPEL5P62699 121 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 TUBB4BP68371 445 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ST5P78524 1137 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ZNF33BQ06732 778 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 NPRL3Q12980 569 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 PAK1Q13153 545 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 NOGQ13253 232 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 CAMK2GQ13555 558 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 CNN3Q15417 329 aaKnown RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 WHAMMP3Q1A5X7 153 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 EPHA10Q5JZY3 1008 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 HP1BP3Q5SSJ5 553 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 C6orf163Q5TEZ5 329 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 PRAMEF20Q5VT98 475 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 TIGD7Q6NT04 549 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 DPY19L2P1Q6NXN4 242 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 RUFY4Q6ZNE9 571 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 RFPL4BQ6ZWI9 263 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 UTS2BQ765I0 119 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 MB21D2Q8IYB1 491 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 SRRM1Q8IYB3 904 aaKnown RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 PM20D2Q8IYS1 436 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 SCML4Q8N228 414 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 RASGEF1CQ8N431 466 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 SFRP1Q8N474 314 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ARFGAP1Q8N6T3 406 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 C19orf47Q8N9M1 422 aaKnown RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 TDRD5Q8NAT2 981 aaKnown RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ANGPTL6Q8NI99 470 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ADAMTS16Q8TE57 1224 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 HEXDCQ8WVB3 486 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 NT5C3BQ969T7 300 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 RMDN1Q96DB5 314 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 WDR89Q96FK6 387 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 PGAP3Q96FM1 320 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ANKRD36BP1Q96IX9 119 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 FBXL18Q96ME1 805 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 NSMCE3Q96MG7 304 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 NEU1Q99519 415 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 TBC1D10AQ9BXI6 508 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 TRIM54Q9BYV2 358 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 C6orf62Q9GZU0 229 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 LHX5Q9H2C1 402 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 TRIM45Q9H8W5 580 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 LZTFL1Q9NQ48 299 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 PFDN4Q9NQP4 134 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 C1GALT1Q9NS00 363 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 PAG1Q9NWQ8 432 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 C14orf119Q9NWQ9 140 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 DDX43Q9NXZ2 648 aaKnown RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 CNOT7Q9UIV1 285 aaKnown RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 RAB21Q9UL25 225 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 DNAJC16Q9Y2G8 782 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 POMT1Q9Y6A1 747 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 TRPM3Q9HCF6 1732 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-211ENST00000562199 BCL9LQ86UU0 1499 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ATRNO75882 1429 aa5.56□□□□□ -1.52
CAPN3-211ENST00000562199 ZMYM6O95789 1325 aa5.55□□□□□ -1.52
CAPN3-211ENST00000562199 PKD1L3Q7Z443 1732 aa5.55□□□□□ -1.52
CAPN3-211ENST00000562199 POM121BA6NF01 834 aa5.55□□□□□ -1.52
CAPN3-211ENST00000562199 ZNF891A8MT65 544 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms