RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 C1orf216Q8TAB5 229 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 ARRDC2Q8TBH0 407 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 GRIN3AQ8TCU5 1115 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 RAPGEF5Q92565 580 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SPATA13Q96N96 652 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 ORAI3Q9BRQ5 295 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 CINPQ9BW66 212 aaPredicted RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 B3GNT4Q9C0J1 378 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SP110Q9HB58 689 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 PCDH9Q9HC56 1237 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 DNAAF2Q9NVR5 837 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 DCAF16Q9NXF7 216 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 RRP15Q9Y3B9 282 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SPTBN4Q9H254 2564 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 CENPFP49454 3210 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 C1QTNF9BB2RNN3 333 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 LIASO43766 372 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 KIF1CO43896 1103 aaKnown RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 PGLSO95336 258 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 DNTTP04053 509 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 GSTA2P09210 222 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 C1QTNF9P0C862 333 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 SERPINB3P29508 390 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 MMP12P39900 470 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 STT3AP46977 705 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 DRG2P55039 364 aaKnown RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 KDSRQ06136 332 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 MTM1Q13496 603 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 TUBB8Q3ZCM7 444 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 SETMARQ53H47 684 aaPredicted RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 MARC1Q5VT66 337 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 DCAF12L1Q5VU92 463 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 IL31Q6EBC2 164 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 KDELC1Q6UW63 502 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 MFSD7Q6UXD7 560 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 SERPINA13PQ6UXR4 307 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 ADAMTSL4Q6UY14 1074 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 LPCAT2Q7L5N7 544 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 ABI3BPQ7Z7G0 1075 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 BBOF1Q8ND07 529 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 P3H4Q92791 437 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 SKA1Q96BD8 255 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 MPP4Q96JB8 637 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 ZFYVE19Q96K21 471 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 AGAP3Q96P47 875 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 PLEKHG4BQ96PX9 1271 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 TDRD1Q9BXT4 1180 aaKnown RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 TRIM7Q9C029 511 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 PAK5Q9P286 719 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 CLEC4EQ9ULY5 219 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 FADS3Q9Y5Q0 445 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 CAPN6Q9Y6Q1 641 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 COL27A1Q8IZC6 1860 aaPredicted RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 FAM187AA6NFU0 413 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 AGAP14A8MT82 685 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 VILLO15195 856 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 EIF3HO15372 352 aaKnown RBP eCLIP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 DAPK3O43293 454 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 MAP3K7O43318 606 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 SNX2O60749 519 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 SIN3BO75182 1162 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 PDGFBP01127 241 aaPredicted RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 HMBSP08397 361 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 CD9P21926 228 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 VIPR1P32241 457 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 IRAK1P51617 712 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 RPS21P63220 83 aaKnown RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 CKAP4Q07065 602 aaKnown RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 CDKN3Q16667 212 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 WHAMMP3Q1A5X7 153 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 GLE1Q53GS7 698 aaKnown RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 ESRP1Q6NXG1 681 aaKnown RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 CYS1Q717R9 158 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 GLRX5Q86SX6 157 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 TICAM1Q8IUC6 712 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 CCNJLQ8IV13 435 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 MPP5Q8N3R9 675 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 ALLCQ8N6M5 410 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 TXNDC5Q8NBS9 432 aaKnown RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 OR52K2Q8NGK3 314 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 SEC14L1Q92503 715 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 COQ10AQ96MF6 247 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 FUT8Q9BYC5 575 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 FOXQ1Q9C009 403 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 TWSG1Q9GZX9 223 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 LRRC40Q9H9A6 602 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 NCDNQ9UBB6 729 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 MBD1Q9UIS9 605 aaPredicted RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 PILRBQ9UKJ0 227 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 MTF2Q9Y483 593 aaPredicted RBP5.67□□□□□ -1.5
LINC01963-201ENST00000562038 EPG5Q9HCE0 2579 aa5.67□□□□□ -1.5
LINC01963-201ENST00000562038 LRRD1A4D1F6 860 aa5.66□□□□□ -1.5
LINC01963-201ENST00000562038 TMCO5BA8MYB1 307 aa5.66□□□□□ -1.5
LINC01963-201ENST00000562038 PGRMC1O00264 195 aaKnown RBP5.66□□□□□ -1.5
LINC01963-201ENST00000562038 VEGFDO43915 354 aa5.66□□□□□ -1.5
LINC01963-201ENST00000562038 PHF2O75151 1096 aa5.66□□□□□ -1.5
LINC01963-201ENST00000562038 RPP40O75818 363 aaKnown RBP5.66□□□□□ -1.5
LINC01963-201ENST00000562038 DKK1O94907 266 aa5.66□□□□□ -1.5
LINC01963-201ENST00000562038 MOCS2O96007 188 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms