RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ZNF106Q9H2Y7 1883 aaKnown RBP11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 CRYBG3Q68DQ2 2970 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 SPTAN1Q13813 2472 aaKnown RBP11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 TRBV23OR9-2A0A075B6M9 112 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 GOLGA6CA6NDK9 693 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 GOLGA6BA6NDN3 693 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 RASA4BC9J798 803 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 NVLO15381 856 aaKnown RBP11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 RASA4O43374 803 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 B4GAT1O43505 415 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 DUX1O43812 170 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 PPFIA2O75334 1257 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 ITGB2P05107 769 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 GOLGA6DP0CG33 693 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 NR1D1P20393 614 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 HTR1BP28222 390 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 EPHB2P29323 1055 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 CDH5P33151 784 aaPredicted RBP11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 MAPKAPK2P49137 400 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 BLKP51451 505 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 POLE2P56282 527 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 ZFP36L1Q07352 338 aaKnown RBP11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 TMEM52BQ4KMG9 183 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 C14orf28Q4W4Y0 310 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 MIIPQ5JXC2 388 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 SNAP47Q5SQN1 464 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 CFAP58Q5T655 872 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 ZNF574Q6ZN55 896 aaPredicted RBP11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 SLITRK4Q8IW52 837 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 OR56A4Q8NGH8 313 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 FNIP1Q8TF40 1166 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 RBM15Q96T37 977 aaKnown RBP eCLIP11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 CTRCQ99895 268 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 ZMYND15Q9H091 742 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 SLC25A18Q9H1K4 315 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 MAGEH1Q9H213 219 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 GOLGA6AQ9NYA3 693 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 PLEKHM1Q9Y4G2 1056 aa11.75□□□□□ -0.53
NSMCE1-202ENST00000561960 RIOK3O14730 519 aaKnown RBP11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 RECQL5O94762 991 aaPredicted RBP11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 FGFR1OPO95684 399 aaKnown RBP11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 FGF3P11487 239 aaPredicted RBP11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 CHRNB2P17787 502 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 GM2AP17900 193 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 SDC4P31431 198 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 MMP12P39900 470 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 MLLT3P42568 568 aaPredicted RBP11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 POLD2P49005 469 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 B4GALNT1Q00973 533 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 RALGDSQ12967 914 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 EIF3IQ13347 325 aaKnown RBP11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 HLTFQ14527 1009 aaKnown RBP eCLIP11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 UGP2Q16851 508 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 EFHC2Q5JST6 749 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 DOK6Q6PKX4 331 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 SLC30A9Q6PML9 568 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 ARHGAP36Q6ZRI8 547 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 FAM129CQ86XR2 697 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 IL22RA1Q8N6P7 574 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 EPS8L1Q8TE68 723 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 ART4Q93070 314 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 TBATAQ96M53 351 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 NSMCE3Q96MG7 304 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 CMKLR1Q99788 373 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 SLC12A9Q9BXP2 914 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 CARS2Q9HA77 564 aaKnown RBP11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 PLAAQ9Y263 795 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 B3GALT1Q9Y5Z6 326 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 ICE1Q9Y2F5 2266 aa11.74□□□□□ -0.53
NSMCE1-202ENST00000561960 CENPEQ02224 2701 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 IGHV5-10-1A0A0J9YXX1 117 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 C2CD4BA6NLJ0 364 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 RHPN2P1A8MT19 583 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 A8MU76 341 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 F8VZ95 297 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 NKX2-8O15522 239 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 CCP110O43303 1012 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 ECEL1O95672 775 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 FUCA1P04066 466 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 GLB1P16278 677 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 CSF2RBP32927 897 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 RFC1P35251 1148 aaPredicted RBP11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 GNPDA1P46926 289 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 GEMIN4P57678 1058 aaKnown RBP11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 RAD51Q06609 339 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 ELP6Q0PNE2 266 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 KCNAB2Q13303 367 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 SERINC3Q13530 473 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 ACOX1Q15067 660 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 MAN2A1Q16706 1144 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 VWA3BQ502W6 1294 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 KLHDC7AQ5VTJ3 777 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 ERAP2Q6P179 960 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 LVRNQ6Q4G3 990 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 DTX1Q86Y01 620 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 NRROSQ86YC3 692 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 PLPP6Q8IY26 295 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 NRSN1Q8IZ57 195 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 TSEN2Q8NCE0 465 aaKnown RBP11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 NKD1Q969G9 470 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms