RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 ZNF395Q9H8N7 513 aaPredicted RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 CAB39LQ9H9S4 337 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 SMPD4Q9NXE4 827 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 TMEM216Q9P0N5 145 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 UXTQ9UBK9 157 aaPredicted RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 A0A1B0GVM2 712 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 TCAF2A6NFQ2 919 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 HGSO14964 777 aaPredicted RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 AURKAO14965 403 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 BIRC5O15392 142 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 MAP3K7O43318 606 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 LDB2O43679 373 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 KRT36O76013 467 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 VAPBO95292 243 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 PRLP01236 227 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 SBK3P0C264 359 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 VARSP26640 1264 aaKnown RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 PTPN4P29074 926 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 SPRP35270 261 aaPredicted RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 RASSF2P50749 326 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 ARSDP51689 593 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 OXCT1P55809 520 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 ERVFC1P60507 584 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 SMAD3P84022 425 aaKnown RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 ARF5P84085 180 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 MPP1Q00013 466 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 IRF9Q00978 393 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 ACVR1Q04771 509 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 BST1Q10588 318 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 VEPH1Q14D04 833 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 PCLAFQ15004 111 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 SLC14A2Q15849 920 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 INSCQ1MX18 579 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 TMEM259Q4ZIN3 620 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 CCDC92Q53HC0 331 aaPredicted RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 RABGAP1LQ5R372 815 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 TSTD2Q5T7W7 516 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 N4BP2L1Q5TBK1 243 aaPredicted RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 MBLAC2Q68D91 279 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 KLC3Q6P597 504 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 KYAT3Q6YP21 454 aaKnown RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 SPRED2Q7Z698 418 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 SETD3Q86TU7 594 aaPredicted RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 SPNS2Q8IVW8 549 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 ARL14EPQ8N8R7 260 aaPredicted RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 C2CD4AQ8NCU7 369 aaPredicted RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 PPHLN1Q8NEY8 458 aaKnown RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 WFDC5Q8TCV5 224 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 WDR60Q8WVS4 1066 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 BADQ92934 168 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 PSKH2Q96QS6 385 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 RHOJQ9H4E5 214 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 STX18Q9P2W9 335 aaKnown RBP10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 KCTD3Q9Y597 815 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 USH1CQ9Y6N9 552 aa10.29□□□□□ -0.76
TUBGCP4-202ENST00000561691 CHD7Q9P2D1 2997 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 SCAMP3O14828 347 aaKnown RBP10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 GLRA3O75311 464 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 TBX10O75333 385 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 ARHGEF15O94989 841 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 PAPSS2O95340 614 aaPredicted RBP10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 PSMG1O95456 288 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 FGF3P11487 239 aaPredicted RBP10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 PSMA3P25788 255 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 CCR2P41597 374 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 SLC1A2P43004 574 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 SERPINH1P50454 418 aaKnown RBP10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 CYP4F8P98187 520 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 OVGP1Q12889 678 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 ZNF789Q5FWF6 425 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 CCDC80Q76M96 950 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 FIBCD1Q8N539 461 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 PNPLA1Q8N8W4 532 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 PPFIBP2Q8ND30 876 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 VOPP1Q96AW1 172 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 ATXN7L3BQ96GX2 97 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 FEM1CQ96JP0 617 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 MIPEPQ99797 713 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 DDX50Q9BQ39 737 aaKnown RBP10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 FSD1LQ9BXM9 530 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 POLR1EQ9GZS1 481 aaKnown RBP10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 NACA2Q9H009 215 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 INIPQ9NRY2 104 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 PTTG2Q9NZH5 202 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 PCDHB12Q9Y5F1 795 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 IRAK3Q9Y616 596 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 CPQQ9Y646 472 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 CHD9Q3L8U1 2897 aa10.28□□□□□ -0.76
TUBGCP4-202ENST00000561691 hCG_2014768A0A024R1R8 64 aa10.27□□□□□ -0.76
TUBGCP4-202ENST00000561691 E2F8A0AVK6 867 aa10.27□□□□□ -0.76
TUBGCP4-202ENST00000561691 HIDE1A8MVS5 230 aa10.27□□□□□ -0.76
TUBGCP4-202ENST00000561691 G3V2L1 256 aa10.27□□□□□ -0.76
TUBGCP4-202ENST00000561691 TIMM44O43615 452 aa10.27□□□□□ -0.76
TUBGCP4-202ENST00000561691 HNRNPCL1O60812 293 aaKnown RBP10.27□□□□□ -0.76
TUBGCP4-202ENST00000561691 MOSPD3O75425 235 aa10.27□□□□□ -0.76
TUBGCP4-202ENST00000561691 DCTN3O75935 186 aa10.27□□□□□ -0.76
TUBGCP4-202ENST00000561691 TGDSO95455 350 aa10.27□□□□□ -0.76
TUBGCP4-202ENST00000561691 EPOP01588 193 aa10.27□□□□□ -0.76
TUBGCP4-202ENST00000561691 FGBP02675 491 aa10.27□□□□□ -0.76
TUBGCP4-202ENST00000561691 C2P06681 752 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms