RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 RNF44Q7L0R7 432 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 C16orf59Q7L2K0 433 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 TMEM161BQ8NDZ6 487 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 MKL1Q969V6 931 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 TRIM39Q9HCM9 518 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 WBP11Q9Y2W2 641 aaKnown RBP13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 NRCAMQ92823 1304 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 LGALS2P05162 132 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 BPGMP07738 259 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 UGT1A5P35504 534 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 RAP1GAP2Q684P5 730 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 MCFD2Q8NI22 146 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 GIPC3Q8TF64 312 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 OR52E6Q96RD3 313 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 OMDQ99983 421 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 BCL2L14Q9BZR8 327 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 SLCO1B3Q9NPD5 702 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 OR10H1Q9Y4A9 318 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 TMEM150BA6NC51 233 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 PLK4O00444 970 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 KLRC4O43908 158 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 LCA5LO95447 670 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 AMHP03971 560 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 CSH1P0DML2 217 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 CSH2P0DML3 217 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 CTSEP14091 401 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 S100GP29377 79 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 FKBP1AP62942 108 aaKnown RBP13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 SPIBQ01892 262 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 UBAP2LQ14157 1087 aaKnown RBP13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 AP5B1Q2VPB7 878 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 CCDC157Q569K6 752 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 XKR6Q5GH73 641 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 SPATA19Q7Z5L4 167 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 DEFB128Q7Z7B8 93 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 CCDC36Q8IYA8 594 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 HEXDCQ8WVB3 486 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 DNAJC19Q96DA6 116 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 PCDH12Q9NPG4 1184 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 TRAF6Q9Y4K3 522 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 MYO3AQ8NEV4 1616 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 MANSC4A6NHS7 340 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 PDHXO00330 501 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 UGT2B11O75310 529 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 EPHX2P34913 555 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 MATKP42679 507 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ACTR3P61158 418 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 DDR1Q08345 913 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 HKDC1Q2TB90 917 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 PLET1Q6UQ28 207 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 RBFAQ8N0V3 343 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 OR2T12Q8NG77 320 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ELMO3Q96BJ8 720 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 HAVCR1Q96D42 359 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 SPACA7Q96KW9 195 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ADAM2Q99965 735 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 PNPLA8Q9NP80 782 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ZNF222Q9UK12 451 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ASTN1O14525 1302 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 C1QTNF3-AMACRE9PGA6 284 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 H3BNX3 289 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 STX16-NPEPL1H3BU86 382 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 STX16O14662 325 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 IFNGP01579 166 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 CCNYL3P0C7X3 344 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ADORA2AP29274 412 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ACVR2BQ13705 512 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 PTGES3Q15185 160 aaKnown RBP13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ATP13A4Q4VNC1 1196 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ISLR2Q6UXK2 745 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 COPS8Q99627 209 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 RHBGQ9H310 441 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 AASDHPPTQ9NRN7 309 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 DKK3Q9UBP4 350 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 USP20Q9Y2K6 914 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 FADS3Q9Y5Q0 445 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 GPC6Q9Y625 555 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 SQORQ9Y6N5 450 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 LDOC1O95751 146 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 IFNA16P05015 189 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ADRB2P07550 413 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 BRMS1LQ5PSV4 323 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ERICH5Q6P6B1 374 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 P2RX7Q99572 595 aaKnown RBP13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ATXN10Q9UBB4 475 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 TRPS1Q9UHF7 1281 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 BTRCQ9Y297 605 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 OGNP20774 298 aaKnown RBP13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 RPL9P32969 192 aaKnown RBP13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ABL2P42684 1182 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 PFKPQ01813 784 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 RASAL3Q86YV0 1011 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 LRRC52Q8N7C0 313 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 PACSIN3Q9UKS6 424 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 GIT1Q9Y2X7 761 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 RPTORQ8N122 1335 aa13.24□□□□□ -0.29
CSPG4P11-201ENST00000560634 IQSEC2Q5JU85 1478 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms