RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 ACVRL1P37023 503 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 CDKN2BP42772 138 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 SERPINH1P50454 418 aaKnown RBP9.23□□□□□ -0.93
IDH3A-217ENST00000559889 GNGT1P63211 74 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 SLC25A11Q02978 314 aaKnown RBP9.23□□□□□ -0.93
IDH3A-217ENST00000559889 PTK6Q13882 451 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 SLMAPQ14BN4 828 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 UBAP2Q5T6F2 1119 aaKnown RBP9.23□□□□□ -0.93
IDH3A-217ENST00000559889 C22orf39Q6P5X5 142 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 DPY19L3Q6ZPD9 716 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 TRIM69Q86WT6 500 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 KDF1Q8NAX2 398 aaPredicted RBP9.23□□□□□ -0.93
IDH3A-217ENST00000559889 TMIEQ8NEW7 156 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 RHBDD1Q8TEB9 315 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 FNIP1Q8TF40 1166 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 ADAMTS14Q8WXS8 1223 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 ARRDC3Q96B67 414 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 PWWP2AQ96N64 755 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 ELF4Q99607 663 aaPredicted RBP9.23□□□□□ -0.93
IDH3A-217ENST00000559889 SPON2Q9BUD6 331 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 ATP13A1Q9HD20 1204 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 AASDHPPTQ9NRN7 309 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 WHRNQ9P202 907 aa9.23□□□□□ -0.93
IDH3A-217ENST00000559889 TPX2Q9ULW0 747 aaKnown RBP9.23□□□□□ -0.93
IDH3A-217ENST00000559889 NOVA2Q9UNW9 492 aaKnown RBP9.23□□□□□ -0.93
IDH3A-217ENST00000559889 NBEAQ8NFP9 2946 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 DOCK4Q8N1I0 1966 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 CABIN1Q9Y6J0 2220 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 LIASO43766 372 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 ATXN1LP0C7T5 689 aaKnown RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 ZSCAN5DPP0CG00 497 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 ETS1P14921 441 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 RHOQP17081 205 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 GPD1P21695 349 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 MAT2AP31153 395 aaKnown RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 ACTN2P35609 894 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 SLCO1A2P46721 670 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 CCT8P50990 548 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 C21orf59P57076 290 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 COPS2P61201 443 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 IL9RQ01113 521 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 SCAPQ12770 1279 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 ZSCAN26Q16670 478 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 P3H1Q32P28 736 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 ARL13BQ3SXY8 428 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 SYDE1Q6ZW31 735 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 POLNQ7Z5Q5 900 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 NTAN1Q96AB6 310 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 TMEM121Q9BTD3 319 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 TXLNGYQ9BZA5 131 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 C10orf88Q9H8K7 445 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 TMEM248Q9NWD8 314 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 WASF2Q9Y6W5 498 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 TMEM131Q92545 1883 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 TLR4O00206 839 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 DFNA5O60443 496 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 CAPNS1P04632 268 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 KDELR1P24390 212 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 ARSEP51690 589 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 ZNF143P52747 638 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 EIF3BP55884 814 aaKnown RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 NXPH1P58417 271 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 GUCY1A3Q02108 690 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 SLC20A2Q08357 652 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 SUZ12Q15022 739 aaKnown RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 ARSIQ5FYB1 569 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 IZUMO3Q5VZ72 239 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 NAPEPLDQ6IQ20 393 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 RETSATQ6NUM9 610 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 RWDD4Q6NW29 188 aaKnown RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 SPATS2Q86XZ4 545 aaKnown RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 RFX6Q8HWS3 928 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 PYROXD2Q8N2H3 581 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 TAB3Q8N5C8 712 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 GLIS1Q8NBF1 620 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 ARHGEF2Q92974 986 aaKnown RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 CEP44Q9C0F1 390 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 ZMYND15Q9H091 742 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 RETREG1Q9H6L5 497 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 PREBQ9HCU5 417 aa9.22□□□□□ -0.93
IDH3A-217ENST00000559889 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 FCF1Q9Y324 198 aaKnown RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-217ENST00000559889 CXorf51AA0A1B0GTR3 108 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 KPNA3O00505 521 aaPredicted RBP9.21□□□□□ -0.93
IDH3A-217ENST00000559889 TP73O15350 636 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 RIPK2O43353 540 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 PRPSAP2O60256 369 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 LEFTY1O75610 366 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 PRNPP04156 253 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 IVDP26440 423 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 GRK6P43250 576 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 MAPKAPK2P49137 400 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 CDH6P55285 790 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 MAGOHP61326 146 aaKnown RBP9.21□□□□□ -0.93
IDH3A-217ENST00000559889 OTUD4Q01804 1114 aaKnown RBP9.21□□□□□ -0.93
IDH3A-217ENST00000559889 ZNF284Q2VY69 593 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 PRPF39Q86UA1 669 aaKnown RBP9.21□□□□□ -0.93
IDH3A-217ENST00000559889 GATAD2AQ86YP4 633 aa9.21□□□□□ -0.93
IDH3A-217ENST00000559889 MFSD2AQ8NA29 543 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms