RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 TRIM67Q6ZTA4 783 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 USP45Q70EL2 814 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 GLT6D1Q7Z4J2 308 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 PALM2Q8IXS6 379 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 PJA1Q8NG27 643 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 GANCQ8TET4 914 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 CAVIN3Q969G5 261 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 LRRC39Q96DD0 335 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 EBNA1BP2Q99848 306 aaKnown RBP10.48□□□□□ -0.73
TPM1-221ENST00000559831 WDR83Q9BRX9 315 aaKnown RBP10.48□□□□□ -0.73
TPM1-221ENST00000559831 TRIM56Q9BRZ2 755 aaKnown RBP10.48□□□□□ -0.73
TPM1-221ENST00000559831 PHACTR1Q9C0D0 580 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 VPS37BQ9H9H4 285 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 FBRSQ9HAH7 460 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 NINJ2Q9NZG7 142 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.48□□□□□ -0.73
TPM1-221ENST00000559831 DKK3Q9UBP4 350 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 ZC3H7BQ9UGR2 993 aaKnown RBP10.48□□□□□ -0.73
TPM1-221ENST00000559831 ZNF711Q9Y462 761 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 TCAF1Q9Y4C2 921 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 TEX264Q9Y6I9 313 aa10.48□□□□□ -0.73
TPM1-221ENST00000559831 A0A0U1RQS6 177 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 HEATR9A2RTY3 570 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 CAPN8A6NHC0 703 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 BUD23O43709 281 aaKnown RBP10.47□□□□□ -0.73
TPM1-221ENST00000559831 ATG13O75143 517 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 ACSL3O95573 720 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 DNTTP04053 509 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 CYP2A6P11509 494 aaPredicted RBP10.47□□□□□ -0.73
TPM1-221ENST00000559831 PGAM1P18669 254 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 ADRA1DP25100 572 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 NFKBIAP25963 317 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 HNF1BP35680 557 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 NEK3P51956 506 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 SIGLEC14Q08ET2 396 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 CNTN1Q12860 1018 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 FZD5Q13467 585 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 SMAD1Q15797 465 aaKnown RBP10.47□□□□□ -0.73
TPM1-221ENST00000559831 KYNUQ16719 465 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 UGP2Q16851 508 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 UBAP2Q5T6F2 1119 aaKnown RBP10.47□□□□□ -0.73
TPM1-221ENST00000559831 ERAP2Q6P179 960 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 KIAA1324Q6UXG2 1013 aaKnown RBP10.47□□□□□ -0.73
TPM1-221ENST00000559831 TTC7BQ86TV6 843 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 TMPRSS6Q8IU80 811 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 PGBD3Q8N328 593 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 HDDC3Q8N4P3 179 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 MDGA1Q8NFP4 955 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 UHMK1Q8TAS1 419 aaKnown RBP10.47□□□□□ -0.73
TPM1-221ENST00000559831 HCAR2Q8TDS4 363 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 HMGB4Q8WW32 186 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 ZNF669Q96BR6 464 aaPredicted RBP10.47□□□□□ -0.73
TPM1-221ENST00000559831 TXLNGYQ9BZA5 131 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 GPR63Q9BZJ6 419 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 MKRN2Q9H000 416 aaKnown RBP10.47□□□□□ -0.73
TPM1-221ENST00000559831 SEMA4AQ9H3S1 761 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 ARFGAP3Q9NP61 516 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 POLMQ9NP87 494 aaPredicted RBP10.47□□□□□ -0.73
TPM1-221ENST00000559831 PCDH12Q9NPG4 1184 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 CHRAC1Q9NRG0 131 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 HACD3Q9P035 362 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 BCCIPQ9P287 314 aaKnown RBP eCLIP10.47□□□□□ -0.73
TPM1-221ENST00000559831 B4GALT6Q9UBX8 382 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 SOX13Q9UN79 622 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 KCTD3Q9Y597 815 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 ARL5AQ9Y689 179 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 RPS6KL1Q9Y6S9 549 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 UNC80Q8N2C7 3258 aa10.47□□□□□ -0.73
TPM1-221ENST00000559831 ZNF106Q9H2Y7 1883 aaKnown RBP10.47□□□□□ -0.73
TPM1-221ENST00000559831 C1orf232A0A0U1RR37 186 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 FAM237BA0A1B0GVD1 139 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 A0A1W2PP55 124 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 NPIPB15A6NHN6 443 aaPredicted RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 CHURC1-FNTBB4DL54 471 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 DYNC1I1O14576 645 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 AURKAO14965 403 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 DCXO43602 365 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 RNASEH2AO75792 299 aaKnown RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 CRTAMO95727 393 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 DCNP07585 359 aaKnown RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 ACADMP11310 421 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 ADRB3P13945 408 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 C5AR1P21730 350 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 NMBRP28336 390 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 SSTR1P30872 391 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 VIPR1P32241 457 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 TMPRSS15P98073 1019 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 MSLNQ13421 630 aaPredicted RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 ARHGEF7Q14155 803 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 GAS6Q14393 721 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 PTPRCAPQ14761 206 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 TAF1AQ15573 450 aaPredicted RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 CRY1Q16526 586 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 TTC31Q49AM3 519 aaPredicted RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 BEND6Q5SZJ8 279 aaPredicted RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 UNC5AQ6ZN44 842 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 ERN2Q76MJ5 926 aaKnown RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 TRMT10CQ7L0Y3 403 aaKnown RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 SYT13Q7L8C5 426 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms