RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 HCAR3P49019 387 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 AP1S1P61966 158 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 POLR2LP62875 67 aaKnown RBP15.02■□□□□ -0
LRRC28-213ENST00000559399 NSUN2Q08J23 767 aaKnown RBP eCLIP15.02■□□□□ -0
LRRC28-213ENST00000559399 DPYSQ14117 519 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 SPIDRQ14159 915 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 TMCO4Q5TGY1 634 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 ARHGAP36Q6ZRI8 547 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 GKN2Q86XP6 184 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 LZTR1Q8N653 840 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 SLC39A7Q92504 469 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 PSKH2Q96QS6 385 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 MRPL47Q9HD33 250 aaKnown RBP15.02■□□□□ -0
LRRC28-213ENST00000559399 CWC15Q9P013 229 aaKnown RBP15.02■□□□□ -0
LRRC28-213ENST00000559399 SIRPGQ9P1W8 387 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 SEPT3Q9UH03 358 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 GPR34Q9UPC5 381 aa15.02■□□□□ -0
LRRC28-213ENST00000559399 SMG1Q96Q15 3661 aaKnown RBP15.02□□□□□ -0.01
LRRC28-213ENST00000559399 ARID1BQ8NFD5 2236 aaPredicted RBP15.01□□□□□ -0.01
LRRC28-213ENST00000559399 A0A1B0GTH6 734 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 A0A1W2PNU3 283 aaPredicted RBP15.01□□□□□ -0.01
LRRC28-213ENST00000559399 H3BRJ5 948 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 CACNB4O00305 520 aaPredicted RBP15.01□□□□□ -0.01
LRRC28-213ENST00000559399 KLK10O43240 276 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 TNFP01375 233 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 PCK1P35558 622 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 SCNN1BP51168 640 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 RENBPP51606 427 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 PDX1P52945 283 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 TMPRSS3P57727 454 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 KIAA1024LP59773 190 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 LBRQ14739 615 aaKnown RBP15.01□□□□□ -0.01
LRRC28-213ENST00000559399 DPPA4Q7L190 304 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 PLA2G15Q8NCC3 412 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 LSM14AQ8ND56 463 aaKnown RBP15.01□□□□□ -0.01
LRRC28-213ENST00000559399 CCDC74AQ96AQ1 378 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 PDXPQ96GD0 296 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 ZNF599Q96NL3 588 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 SLC46A1Q96NT5 459 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 RBM15Q96T37 977 aaKnown RBP eCLIP15.01□□□□□ -0.01
LRRC28-213ENST00000559399 DPH1Q9BZG8 443 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 MYO1AQ9UBC5 1043 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 DGKBQ9Y6T7 804 aa15.01□□□□□ -0.01
LRRC28-213ENST00000559399 NTN3O00634 580 aaPredicted RBP15□□□□□ -0.01
LRRC28-213ENST00000559399 TRAFD1O14545 582 aaPredicted RBP15□□□□□ -0.01
LRRC28-213ENST00000559399 KELP23276 732 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 ARL4AP40617 200 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 MLLT3P42568 568 aaPredicted RBP15□□□□□ -0.01
LRRC28-213ENST00000559399 ZNF165P49910 485 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 ZNF235Q14590 738 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 DPYSL2Q16555 572 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 SMTNL2Q2TAL5 461 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 FOXR1Q6PIV2 292 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 TMCO3Q6UWJ1 677 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 LIPIQ6XZB0 460 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 NYAP1Q6ZVC0 841 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 ARL14Q8N4G2 192 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 OR6C4Q8NGE1 309 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 OR56A4Q8NGH8 313 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 WDR36Q8NI36 951 aaKnown RBP15□□□□□ -0.01
LRRC28-213ENST00000559399 OR1E3Q8WZA6 343 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 FUBP1Q96AE4 644 aaKnown RBP15□□□□□ -0.01
LRRC28-213ENST00000559399 NAP1L5Q96NT1 182 aaPredicted RBP15□□□□□ -0.01
LRRC28-213ENST00000559399 WDR26Q9H7D7 661 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 BAHCC1Q9P281 2608 aa15□□□□□ -0.01
LRRC28-213ENST00000559399 KNTC1P50748 2209 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 CCDC187A0A096LP49 1063 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.99□□□□□ -0.01
LRRC28-213ENST00000559399 A0A1W2PQ67 120 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 PMS2P1A4D2B8 440 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 CASC3O15234 703 aaKnown RBP14.99□□□□□ -0.01
LRRC28-213ENST00000559399 SOCS5O75159 536 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 SERPINC1P01008 464 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 PRB1P04280 392 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 SKILP12757 684 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 IL1R2P27930 398 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 HSPA9P38646 679 aaKnown RBP14.99□□□□□ -0.01
LRRC28-213ENST00000559399 SLC10A7Q0GE19 358 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 C19orf57Q0VDD7 668 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 ACOX1Q15067 660 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 BOLA3Q53S33 107 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 FIGNQ5HY92 759 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 KCTD16Q68DU8 428 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 TP53INP2Q8IXH6 220 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 SPOCK2Q92563 424 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 HSPH1Q92598 858 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 CCDC97Q96F63 343 aaPredicted RBP14.99□□□□□ -0.01
LRRC28-213ENST00000559399 PRR11Q96HE9 360 aaPredicted RBP14.99□□□□□ -0.01
LRRC28-213ENST00000559399 ISCUQ9H1K1 167 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 CPNE5Q9HCH3 593 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 FGF22Q9HCT0 170 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.99□□□□□ -0.01
LRRC28-213ENST00000559399 B4GALT6Q9UBX8 382 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 RABGEF1Q9UJ41 708 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 TRPM6Q9BX84 2022 aa14.99□□□□□ -0.01
LRRC28-213ENST00000559399 CHD5Q8TDI0 1954 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 TMEM202A6NGA9 273 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 A8MX80 341 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 CDRT15L2A8MXV6 281 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 D6RAR5 112 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms