RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 DYNC1I1O14576 645 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 TTC4O95801 387 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 ALPIP09923 528 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 C7P10643 843 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 ABL2P42684 1182 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 PSMD8P48556 350 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 PTPRRQ15256 657 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 CST6Q15828 149 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 KYNUQ16719 465 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 ZNF776Q68DI1 518 aaPredicted RBP18.15■□□□□ 0.5
CLPX-203ENST00000558958 TMEM92Q6UXU6 159 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 PARS2Q7L3T8 475 aaKnown RBP18.15■□□□□ 0.5
CLPX-203ENST00000558958 CCNJLQ8IV13 435 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 NDUFAF2Q8N183 169 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 PPHLN1Q8NEY8 458 aaKnown RBP18.15■□□□□ 0.5
CLPX-203ENST00000558958 LYSMD1Q96S90 227 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 SRPK1Q96SB4 655 aaKnown RBP18.15■□□□□ 0.5
CLPX-203ENST00000558958 MRM3Q9HC36 420 aaKnown RBP18.15■□□□□ 0.5
CLPX-203ENST00000558958 CHRAC1Q9NRG0 131 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 HACD3Q9P035 362 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 TCAF1Q9Y4C2 921 aa18.15■□□□□ 0.5
CLPX-203ENST00000558958 FAM237BA0A1B0GVD1 139 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 HEATR9A2RTY3 570 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 MROH6A6NGR9 719 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 CAPN8A6NHC0 703 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 UPK3BL1B0FP48 263 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 UPK3BL2E5RIL1 263 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 ADH1BP00325 375 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 PGAM1P18669 254 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 HNF1BP35680 557 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 RPS14P62263 151 aaKnown RBP18.14■□□□□ 0.5
CLPX-203ENST00000558958 GAS6Q14393 721 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 CRY1Q16526 586 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 UBAP2Q5T6F2 1119 aaKnown RBP18.14■□□□□ 0.5
CLPX-203ENST00000558958 USP45Q70EL2 814 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 TMEM135Q86UB9 458 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 PALM2Q8IXS6 379 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 MDGA1Q8NFP4 955 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 PJA1Q8NG27 643 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 CLDN23Q96B33 292 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 TTC25Q96NG3 672 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 TRIM56Q9BRZ2 755 aaKnown RBP18.14■□□□□ 0.5
CLPX-203ENST00000558958 HDAC8Q9BY41 377 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 EPB41L4BQ9H329 900 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 PABPC3Q9H361 631 aaKnown RBP18.14■□□□□ 0.5
CLPX-203ENST00000558958 TRABDQ9H4I3 376 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 PLAC1Q9HBJ0 212 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 LRRC4CQ9HCJ2 640 aa18.14■□□□□ 0.5
CLPX-203ENST00000558958 POLR3BQ9NW08 1133 aaPredicted RBP18.14■□□□□ 0.5
CLPX-203ENST00000558958 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.14■□□□□ 0.5
CLPX-203ENST00000558958 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.14■□□□□ 0.5
CLPX-203ENST00000558958 STK25O00506 426 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 AURKAO14965 403 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 MID1O15344 667 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 LDB2O43679 373 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 C5AR1P21730 350 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 GPX6P59796 221 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 SIGLEC14Q08ET2 396 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 LAMB3Q13751 1172 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 SEPT6Q14141 434 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 TAF1AQ15573 450 aaPredicted RBP18.14■□□□□ 0.49
CLPX-203ENST00000558958 UAP1Q16222 522 aaPredicted RBP18.14■□□□□ 0.49
CLPX-203ENST00000558958 SPDYCQ5MJ68 293 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 STEAP4Q687X5 459 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 UNC5AQ6ZN44 842 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 ERN2Q76MJ5 926 aaKnown RBP18.14■□□□□ 0.49
CLPX-203ENST00000558958 SYT13Q7L8C5 426 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 GLT6D1Q7Z4J2 308 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 TTC7BQ86TV6 843 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 TMPRSS6Q8IU80 811 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 EDAQ92838 391 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 CFAP36Q96G28 342 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 ZNF778Q96MU6 729 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 PCDH12Q9NPG4 1184 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 DYRK4Q9NR20 520 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 ZNF711Q9Y462 761 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 ARL5AQ9Y689 179 aa18.14■□□□□ 0.49
CLPX-203ENST00000558958 NPIPB15A6NHN6 443 aaPredicted RBP18.13■□□□□ 0.49
CLPX-203ENST00000558958 RIPK2O43353 540 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 ATG13O75143 517 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 USP1O94782 785 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 ACSL3O95573 720 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 CRTAMO95727 393 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 POLBP06746 335 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 TSHRP16473 764 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 XPAP23025 273 aaPredicted RBP18.13■□□□□ 0.49
CLPX-203ENST00000558958 NFKBIAP25963 317 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 SSTR1P30872 391 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 DRD3P35462 400 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 HSD17B3P37058 310 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 SUOXP51687 545 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 CDKN3Q16667 212 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 ANKRD20A4Q4UJ75 823 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 LRRC73Q5JTD7 316 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 TSTD2Q5T7W7 516 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 FBXL19Q6PCT2 694 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 CES3Q6UWW8 571 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 TRIM67Q6ZTA4 783 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 NLRP9Q7RTR0 991 aa18.13■□□□□ 0.49
CLPX-203ENST00000558958 TTC30BQ8N4P2 665 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms