RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 AP1S1P61966 158 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 BCL2L1Q07817 233 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 ZNF211Q13398 564 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 AGERQ15109 404 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 IRF4Q15306 451 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 CNGA3Q16281 694 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 KCTD19Q17RG1 926 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 MICALCLQ6ZW33 695 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 DPPA4Q7L190 304 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 HSD11B1LQ7Z5J1 315 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 RFX6Q8HWS3 928 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 MAP7D3Q8IWC1 876 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 EXD1Q8NHP7 514 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 SPATA22Q8NHS9 363 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 FEM1CQ96JP0 617 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 COQ10AQ96MF6 247 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 MCCC1Q96RQ3 725 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 GRPEL1Q9HAV7 217 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 DDX56Q9NY93 547 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 PCDHB9Q9Y5E1 797 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 RAI2Q9Y5P3 530 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 U3KQA8 63 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 TRIM38O00635 465 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 PCDHGA12O60330 932 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 SDC3O75056 442 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 CELA2BP08218 269 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 MYF5P13349 255 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 SPINK2P20155 84 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 EPHA8P29322 1005 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 HNF1BP35680 557 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 PTSQ03393 145 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 KLF1Q13351 362 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 ZNF235Q14590 738 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 BRAT1Q6PJG6 821 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 KYAT3Q6YP21 454 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 BBS12Q6ZW61 710 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 TECPR1Q7Z6L1 1165 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 ADAT2Q7Z6V5 191 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 IQCHQ86VS3 1027 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 MARCH9Q86YJ5 346 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 LRRC49Q8IUZ0 686 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 NAXDQ8IW45 347 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 RCOR2Q8IZ40 523 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 HES6Q96HZ4 224 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 AGAP2Q99490 1192 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 LGR4Q9BXB1 951 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 TMEM121BQ9BXQ6 578 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 TDRD1Q9BXT4 1180 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 SLC32A1Q9H598 525 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 ATP13A3Q9H7F0 1226 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 ERVMER34-1Q9H9K5 563 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 CHKBQ9Y259 395 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 R3HDM2Q9Y2K5 976 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 PCDHGB2Q9Y5G2 931 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 PCYT1BQ9Y5K3 369 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 ST14Q9Y5Y6 855 aa12.7□□□□□ -0.38
RABGGTA-207ENST00000558936 ARHGEF17Q96PE2 2063 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 LAMA5O15230 3695 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 FREM2Q5SZK8 3169 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 SPTY2D1-AS1A0A0U1RR47 76 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 SOCS5O75159 536 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 TM7SF2O76062 418 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 RECQL5O94762 991 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 HEXIM1O94992 359 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 ZRANB2O95218 330 aaKnown RBP eCLIP12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 MT-CYBP00156 380 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 C1SP09871 688 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 ATXN1LP0C7T5 689 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 SERPINA4P29622 427 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 CA5AP35218 305 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 RENBPP51606 427 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 CLDN6P56747 220 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 C21orf59P57076 290 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 RAD51Q06609 339 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 OLIG2Q13516 323 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 STAT4Q14765 748 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 NOMO1Q15155 1222 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 PPP2R5EQ16537 467 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 TFDP3Q5H9I0 405 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 CRTC1Q6UUV9 634 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 SFTPA2Q8IWL1 248 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 RBFAQ8N0V3 343 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 PNPLA1Q8N8W4 532 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 KIAA1524Q8TCG1 905 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 IMP4Q96G21 291 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 KLHDC7BQ96G42 594 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 OXNAD1Q96HP4 312 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 ZNF830Q96NB3 372 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 CLPBQ9H078 707 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 USP29Q9HBJ7 922 aa12.69□□□□□ -0.38
RABGGTA-207ENST00000558936 A0A0J9YYE9 177 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 GCATO75600 419 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 TRBC1P01850 177 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 PTPN7P35236 360 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 HSPA9P38646 679 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 CD86P42081 329 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 AP1B1Q10567 949 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 MSLNQ13421 630 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 INPP5AQ14642 412 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms